Bdellovibrio sp. NC01: DOE51_02845
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Entry
DOE51_02845 CDS
T06360
Name
(GenBank) amidase
KO
K21470
L,D-transpeptidase YcbB
Organism
bdc
Bdellovibrio sp. NC01
Brite
KEGG Orthology (KO) [BR:
bdc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bdc01002
]
DOE51_02845
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bdc01011
]
DOE51_02845
Peptidases and inhibitors [BR:
bdc01002
]
Cysteine peptidases
Family C82
DOE51_02845
Peptidoglycan biosynthesis and degradation proteins [BR:
bdc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
DOE51_02845
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QDK39614
UniProt:
A0A514X2T3
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Position
580933..582462
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AA seq
509 aa
AA seq
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MISGPVRAQYNQSEAERFLTVSGQPDYIAIIDQLSLDDMRNTLLGIWVQGLNPRAYWTDD
MEWAYQRNGSADKNLKARTNQEFLQMLQDLYSGSVDPQLVGFDIKFVQKNFLTTKQLQAL
LLAAGNSAGAIVEAVAPQNPPYLSVKEALKRIYPACSNGQWTPIKPSKKSLKLNVKDNVI
IDIKKRLALLGYRFTNYDNLYDSDLLAAINDIQWNLRVKPDGVISPGGRTWTWFNVSCVD
RVRQMQADMEKMRWFPQRFEDRYIFVNLAMTYFGMLDRKQNMSMAFRTINGRPERKSPTM
RDEIVTVILNPSWVVPPTVFMQDKVEEIKNLPYWEINNYFNSHNYEVWNKNFTKRIDPST
IDWWGISQGTVAVDIYIRQKPHLGNALGVVKFELTNSFSIYLHDTNQRELFAEPQRQISS
GCIRLEKPFDLAEYLLQGTQWTRQVIEATVAKPGEVLNKSTEISLKKEQRMPVYLAYLTS
QMSSDGVIRFVIDSYDQNSDIRRYLASPF
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgatcagtggccctgttcgcgcgcagtacaatcaatccgaagctgaaagatttttgacc
gtctctgggcagcctgattacatcgcgattatcgatcaattgtctttagatgacatgcgc
aacacgttgttaggaatttgggtgcagggtttaaatccgcgcgcttattggactgatgac
atggagtgggcctatcaacgtaatggcagtgctgataaaaatttaaaagcgcgcactaac
caagaatttctgcaaatgctccaagacttgtacagcggcagcgtcgatccacaacttgtc
ggctttgatattaagtttgtgcagaaaaatttcctgacgacaaaacagttgcaggcgcta
ctgcttgccgcaggtaacagtgctggtgcgattgtcgaggccgtagctccgcagaatcct
ccgtacttatcagtgaaagaagcgttgaagcgcatttatccggcatgctcgaatgggcag
tggacgccgatcaaaccttcgaaaaaatccttgaaattaaatgtgaaagataacgtgatt
atcgatattaaaaagcgcctagcacttttaggttatcgcttcacgaactacgacaatctt
tatgacagtgatttgttagcagcaatcaacgatattcagtggaatttaagagtgaaacca
gacggcgtgatttcccctgggggtagaacatggacgtggtttaacgtatcttgtgttgat
cgtgtcagacaaatgcaagccgatatggaaaaaatgcgctggtttccacaacgcttcgaa
gatcgttatatcttcgtgaatcttgcgatgacttacttcggtatgctggatagaaaacaa
aatatgtcgatggctttcaggaccatcaatggtcgtcccgagcgtaaatcaccaacgatg
cgtgatgaaattgtgacggtaatcttaaatccatcgtgggtcgtgccaccaacagtattc
atgcaagacaaggtggaagagattaaaaatcttccgtattgggaaattaataactacttc
aacagccacaactatgaagtttggaataagaattttacgaaacgtattgatccatcaacg
atcgattggtggggtatcagccaaggtactgtagctgtcgatatttatattcgtcagaaa
ccgcatcttggtaatgctttaggtgtcgtgaagtttgaattgacgaattcattctcgatt
tacttgcacgatacaaatcaacgcgagctgtttgcggagccgcaacgacaaatcagttcg
ggttgtattcgcttagaaaaaccgtttgatcttgccgaatatcttctacagggtacgcag
tggactcgtcaggtgattgaagccactgttgcaaaaccgggtgaagttttaaataagtcg
acagaaatctcattgaagaaagagcagcgtatgccggtgtacctcgcatatctgacttca
caaatgagttctgacggcgtcatccgatttgtgatcgattcctacgatcagaactctgat
atccgaagatatttggcatcacccttttga
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