Bdellovibrio sp. NC01: DOE51_03290
Help
Entry
DOE51_03290 CDS
T06360
Name
(GenBank) ATP-dependent helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bdc
Bdellovibrio sp. NC01
Pathway
bdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DOE51_03290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdc03019
]
DOE51_03290
Enzymes [BR:
bdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DOE51_03290
Messenger RNA biogenesis [BR:
bdc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DOE51_03290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
CMS1
HEM4
Phage_integrase
CHASE8
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QDK36693
LinkDB
All DBs
Position
complement(670129..671433)
Genome browser
AA seq
434 aa
AA seq
DB search
MQTTKFTDLPLIEPLQKAVAESGYTNPTPIQIQSIPHLLEGRDLLGSAQTGTGKTAAFAL
PMLQTLYKNHRRPEPKHPRALILSPTRELAIQIHESFKTYGKHIRMRYSVIFGGVNQGPQ
TKELAAGVDVLIATPGRLLDLIQQKYVHLNKLEVFVLDEADRMLDMGFLPDIRKIVQLLP
AQRQNLFFSATMPHDIKKLADSLLTNPVRVEVNPVSSTAEMIEQSVMFVDKSKKRDLLRT
LLKDKAFQRVIVFTRTKHGANRVVETLQKNQIPAEAIHGNKSQNARQRALENLREGRIRV
LVATDIAARGIDIDNITHVINFELPHETESYVHRIGRTARAGQQGQAIAFCDAEEKSFLR
EIEKLIGKSIPVIKDQPYHSEDVEKAAVMSKGKAKAIIEGRGEREGGGGGKIQKRRRFNP
RKKAPTFEKSAKKK
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcagactacgaaatttactgatcttcctttgattgagcctcttcaaaaagctgttgca
gaatctggttatacaaacccaactccgattcagatccaatccattccccacttgttggag
ggacgcgatcttttgggttctgcgcagacaggaactggcaagacggcagcctttgcgttg
ccgatgcttcaaactctttacaaaaatcaccgtcgcccggaaccgaaacatccgcgcgct
ttgattctttcaccaacacgtgaattggcgattcaaattcacgaaagcttcaaaacttac
ggcaagcacattcgcatgcgctattctgtgatttttggtggcgtgaaccaaggtccacaa
acgaaagaactcgcagcaggtgttgatgtcttgatcgcgacgccgggtcgtttgttggat
ttgatccaacaaaaatacgtgcacttgaacaaacttgaagttttcgttttagacgaagcg
gatcgtatgttggatatgggcttcttgcccgatatccgcaaaatcgtgcaattgcttcca
gcacaacgtcagaatttgtttttctctgcgacgatgccccacgatatcaagaaacttgcg
gactcgttgttaacaaatcctgtgcgtgttgaagtcaatccagtttcttcaacggccgaa
atgatcgaacaatccgtgatgttcgttgataagagcaaaaaacgcgatttattgcgcacg
cttttgaaagacaaagcgttccaacgcgtgatcgtgttcactcgtacaaagcatggtgcg
aaccgtgtcgttgaaactcttcaaaagaatcaaattcctgcggaagcaattcacggcaac
aaatctcaaaacgcacgtcaacgtgctttagaaaatttgcgtgaaggccgtatccgcgtg
ctggtcgctactgatatcgctgctcgtggtatcgacatcgataacatcacgcacgtaatt
aactttgaacttcctcacgaaacagaaagctacgtgcaccgtatcggtcgtacagctcgc
gcgggtcaacaaggccaagcgatcgcgttctgtgatgcagaagaaaaatctttccttcgc
gaaatcgaaaagcttatcggcaaatcgattcctgtgattaaagatcagccctaccactct
gaagatgtggaaaaagcggcggtcatgtctaaaggtaaagcgaaagcgatcatcgaaggt
cgtggcgagcgtgaaggtggtggcggtggtaaaatccaaaaacgtcgcagattcaatccg
cgtaaaaaagctccaacattcgaaaagagtgctaagaaaaaatga
DBGET
integrated database retrieval system
