Bdellovibrio sp. NC01: DOE51_03865
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Entry
DOE51_03865 CDS
T06360
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bdc
Bdellovibrio sp. NC01
Pathway
bdc03030
DNA replication
bdc03410
Base excision repair
bdc03420
Nucleotide excision repair
bdc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DOE51_03865
03410 Base excision repair
DOE51_03865
03420 Nucleotide excision repair
DOE51_03865
03440 Homologous recombination
DOE51_03865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdc03032
]
DOE51_03865
03400 DNA repair and recombination proteins [BR:
bdc03400
]
DOE51_03865
Enzymes [BR:
bdc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DOE51_03865
DNA replication proteins [BR:
bdc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DOE51_03865
DNA repair and recombination proteins [BR:
bdc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DOE51_03865
NER (nucleotide excision repair)
GGR (global genome repair) factors
DOE51_03865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QDK36793
LinkDB
All DBs
Position
791305..793917
Genome browser
AA seq
870 aa
AA seq
DB search
MKKLYLVDVSSMFFRAFYAIRPLTSPAGVPVNAVYGFLSMISKLMKDEKPEYLVFCYDRK
EPSFRHEMYDQYKAHRSEMPEDLGVQIPYIKRLADVMGVPSLEVPTFEADDIIGTLTKYG
RRQGMDVVIVSGDKDFAQLIEPGVVLYDTMKDIKYDSEGAFNKWGVRPDQFIDFLAILGD
SVDNVPGVKGVGEKGAIKLLEQFKHLEDIYENIDKVESKSVKEKLLASKDNALISKKLVI
ISTDIPIDENLETYKLRPWKTEELRALLRELNFKNFEKNLLGLEGEDKLKADGTNWYSET
ANPSPQKVQVAAAPANVSDPLTASIAEITEYTAQEYPEVKMSTRELTEVLAENQPLWGFQ
DERGVFLGTDKEVISVSDSENLGILTDTFNVRWSGFDLKEFWHKIGAKTPVAAWDSMLGA
YILKAGDATDFAKMYNKFMGEELREMPTPSQLYNSHLHFAKTIQKLLKEVHGDKVYNTLE
LPLANVLLAMENWGIRIDTDLLKKESEDLAKEISELETAIHKEAGESFNVGSPKQLGVVL
FEKMGLPAGKKTKTGYSTDEEVMLGLEHPIAKLILSWRELSKLKSTYVDAIPALISPKDQ
RVHTSFNQALTTTGRLSSTHPNLQNIPVRTERGQRVRKAFIAAPRMKLMSVDYSQIELRI
LAHISEDPNMMKAFAEDLDIHAATAAEVYGIDLKAVTSEHRRAAKAVNFGIAYGQGAFGL
AENLGISRSEAKDIIDRYFTRFKNVRDYIEGTIKLAHEQGYVETLFGRRRYIDELKSKNM
ALKKFGERAAINAPIQGTASDIVKKAMIDVAAKVPVRMLLQVHDELIFEDTEANLQKYSA
ELVKIMESVVALKVPLKVNYAIGDNWDEAH
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctctatttagttgatgtcagttctatgttttttcgcgccttttacgcgatc
agaccgctgacgtctccggcgggtgttccagtgaacgccgtctatggtttcctcagcatg
atttccaaactcatgaaagatgagaagccagaataccttgtgttctgttacgaccgtaaa
gaaccttctttccgtcacgaaatgtacgaccaatacaaagcgcaccgttcagaaatgcct
gaagaccttggcgtgcaaattccttacatcaaacgtttagctgacgtgatgggtgtgcca
tcgctggaagtgccaacgttcgaggccgacgacatcatcggcacgttaacaaaatatggc
cgccgtcaaggcatggacgtagtcatcgtgtcaggcgataaagacttcgcgcagttgatc
gaacctggcgttgttctttacgacacaatgaaggacatcaaatacgactctgagggagcc
ttcaataaatggggcgtgcgcccagatcagttcatcgatttcttggcgatccttggcgac
tcggtcgataacgtcccgggagtgaaaggtgtcggcgaaaaaggtgcgattaagttgctt
gaacagtttaaacaccttgaagacatctacgaaaacatcgacaaagttgaaagcaaaagc
gtgaaagaaaagcttcttgcttctaaagacaatgctttgatttccaaaaagctcgtgatt
atttcaacggatattccgatcgatgagaatctagagacctataaacttcgtccttggaag
accgaagagcttcgcgctttattgcgtgagctgaatttcaaaaacttcgagaaaaatctt
ttaggtcttgaaggcgaagataaacttaaagctgacggtacaaactggtattcggaaact
gccaacccttcgcctcaaaaagtgcaagtagcagcggctccagcaaatgtcagcgatcca
ttgacggcctctattgcagagatcactgaatacaccgctcaagaataccctgaagtgaaa
atgtcgactcgtgagctaacagaagtgttggcagagaatcagcctttatggggcttccaa
gacgaacgcggggttttccttggtactgacaaagaagtgatttcggtttccgattcagaa
aacttgggtatcttaactgatactttcaatgttcgctggagcggatttgatctgaaagaa
ttctggcataagatcggcgcaaaaactccggtcgctgcgtgggatagcatgcttggtgct
tacattttgaaggccggtgatgcgactgacttcgcaaaaatgtacaacaagtttatgggt
gaagagttgcgtgaaatgccaactccatcacagctttacaattcgcatttacattttgcc
aagacaatccaaaaacttcttaaagaagttcacggcgacaaagtttacaacaccctagaa
ttgccactcgcaaacgtcttacttgcgatggaaaactggggtattcgcatcgacacggat
cttttgaaaaaagaaagtgaagatttggcgaaagaaatctcggaacttgaaaccgcaatt
cacaaagaagcaggtgaaagtttcaacgtcggcagtccaaaacaattgggcgtcgttctg
tttgaaaaaatgggtctgccagccggtaaaaaaacgaaaactggctattcaacagatgaa
gaagtgatgttgggactagaacatccgattgcgaaattgattttgagctggcgtgaactt
tcaaaattaaaatcgacatacgtagatgcaattccagcgttgatctctccaaaagatcag
cgtgtgcacacaagcttcaatcaagcactgacaacgacgggccgtctttcaagtactcat
ccgaacttgcaaaacatccccgtcagaacagagcgtggtcagcgtgtgcgtaaagccttt
atcgcggctccacgaatgaagttgatgtctgtcgactattcacaaattgagctaagaatc
ttggcgcacatttctgaagatccaaacatgatgaaagccttcgctgaagacctagatatc
catgcggcaaccgctgcggaagtttatggtatcgacttgaaggctgtgacatcagaacat
cgccgtgcagccaaagctgtgaactttggtatcgcttacggtcagggagcattcggttta
gctgaaaacttaggtatttctcgttcggaagcgaaagatattatcgatcgttacttcacg
cgctttaaaaacgtgcgcgactatatcgaaggcacgatcaaattggcccacgaacaaggt
tacgtagaaacattgttcggtcgtcgtcgttacatcgatgaactgaagtctaagaacatg
gctttgaaaaaatttggcgagcgcgccgcaatcaatgccccgattcaaggaacggcaagt
gacatcgttaaaaaagcgatgatcgatgtcgccgcaaaagttccagtgcgcatgctgctt
caagtgcatgacgaattgatcttcgaagacacagaagcaaacttgcaaaagtactctgct
gaattagtgaagatcatggaatcggtggttgctttgaaggttccgctcaaggtcaattat
gccatcggcgataattgggacgaagcccactaa
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