Bdellovibrio sp. NC01: DOE51_03895
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Entry
DOE51_03895 CDS
T06360
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
bdc
Bdellovibrio sp. NC01
Pathway
bdc00541
Biosynthesis of various nucleotide sugars
bdc01100
Metabolic pathways
bdc01250
Biosynthesis of nucleotide sugars
Module
bdc_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
bdc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DOE51_03895 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bdc01005
]
DOE51_03895 (kdsB)
Enzymes [BR:
bdc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
DOE51_03895 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
bdc01005
]
Lipid A
DOE51_03895 (kdsB)
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
IspD
CdhD
Motif
Other DBs
NCBI-ProteinID:
QDK36798
UniProt:
A0A514WTF4
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Position
798552..799292
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AA seq
246 aa
AA seq
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MKIVGVIPARYGSTRFPGKPLVSLKGRPLIQWTIEGSKKSRLLSDVIVATDDERIKAAAE
AVGCKVAMTDSDLPSGSDRIHAAIKDIDCDVVVNIQGDEPLVTGELVDRLAQVFIDDPTM
DMATLAHPISEEELQSVNSVKVVLNHKDEALYFSRFAMPYSRMKASELGTYEGCLKHIGM
YAYSKKFLKQFCEAPQALIEKAESLEQLRALYLGAKIKVVRVKEASLGVDTPEDLVKLEK
LLSQGK
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtcggagtgattcctgctaggtacggttcaactcgttttcccgggaagcct
ctggtgtctttaaaaggtcgaccgcttattcagtggacgatcgagggttccaaaaaatcc
cgccttctgagcgatgtgatcgtcgcaactgatgatgaaagaatcaaagccgcagcagaa
gctgtcggttgcaaagttgcgatgacggacagtgatcttccttctggaagtgatcgtatt
catgctgccatcaaagatatcgattgcgacgtcgttgttaacattcaaggtgatgagcct
ttagtgacaggcgagctagtcgatagattagcgcaggtttttattgatgatccgacgatg
gatatggcgacacttgcccatccgatcagtgaagaagaactgcaatcggtcaattcagtg
aaagtcgttttgaatcacaaagatgaagctttgtacttcagtcgctttgcgatgccttat
tcgcgcatgaaagcttccgagcttggtacatatgagggttgtttaaaacacatcggcatg
tatgcgtattcgaaaaagtttttaaagcagttctgtgaagctcctcaagctttgattgaa
aaagcagaaagtcttgagcagcttcgtgctttatatttaggtgcaaaaattaaagtggtt
cgtgtgaaagaagctagccttggggtggatactcctgaggatctagtgaaactcgaaaag
ctattaagccaaggaaaataa
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