Bdellovibrio sp. NC01: DOE51_04650
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Entry
DOE51_04650 CDS
T06360
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bdc
Bdellovibrio sp. NC01
Pathway
bdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DOE51_04650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdc03019
]
DOE51_04650
03400 DNA repair and recombination proteins [BR:
bdc03400
]
DOE51_04650
Enzymes [BR:
bdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DOE51_04650
Messenger RNA biogenesis [BR:
bdc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DOE51_04650
DNA repair and recombination proteins [BR:
bdc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DOE51_04650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QDK36931
UniProt:
A0A514WTU5
LinkDB
All DBs
Position
955862..957304
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AA seq
480 aa
AA seq
DB search
MLDLHELLKKNFDYSSFRGEQEEILRKVWANENLLALMPTGMGKSLCFQFPAKIRDGLVI
VISPLIALMQDQVLKAKDLGIPATCLNSTLTRDEREQRQARLAAGDYKLLYVTPERFRKP
EFLKAIEGRKIQLLAVDEAHCISQWGHDFRPDYSRVGEFRELLGNPPTLALTATATPEVQ
KDILAKLHIPEAQIISAGIERPNLSLNVHDMYGIDEKIRAMVALRHQHGGTAIIYVSLIG
TLKKISSSLNRLGVQHLVYHGDLSPQDRKRNQKAFISGENPLMIATPAFGLGIDKNNVRL
LIHAEVPSALESYFQEVGRAGRDGQESSCHLLYDQDDVSIQMEFLKWSHPEPEFIRKVYQ
LIDENRLRVNQEKFDFLREQMNFKNRRDFRVEAAVSILERWGCLEKSDDPFPFQCVHEPT
DEQFAAENGPQILRAQNSKLLEMVRWATQDKECRMNYIYHYFGHKHETPCGKCDWCRSQV
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgttggacctccacgaactcctaaaaaagaacttcgattatagctcctttcggggcgag
caagaagagattttgcgcaaggtttgggcaaatgaaaatctcctcgcattaatgccgacc
ggaatgggcaaaagcctgtgttttcagttcccagctaaaatccgagacgggcttgtgatc
gtaatttcgcctctaatcgcactaatgcaagatcaggttctgaaagccaaagatcttggg
atcccggcgacgtgcctgaactcaactttaacgcgcgatgagcgtgagcagcgtcaagcg
cgcctggctgccggcgattacaaactgctgtacgtgacgcccgagcgttttcgcaagcct
gaattcttaaaagccatcgaggggcgtaagatccaacttttggcggtcgatgaggcgcac
tgtatttcgcagtggggccatgacttcagaccggactattcgcgtgtcggggagttccgc
gagcttttgggaaacccgccaacgttggcattgaccgcaacggcgactccggaagttcaa
aaagatattttagcgaaattgcatattcccgaagcacaaattatttcggcgggaattgag
cgcccgaatctttctttgaacgtgcatgacatgtacggcattgatgaaaaaattcgtgcg
atggtggcacttcgtcatcaacatggcggaacggcgatcatttacgtgtcgttgattgga
actttaaagaaaatttcttcgtcgctgaatcgtctgggcgtgcagcacttggtctatcac
ggcgatttgtcgcctcaagatcgtaaacgcaatcagaaagcttttattagtggtgaaaat
cctttgatgattgcgacaccggcattcggtttgggcattgataaaaacaatgtgcgcttg
ctgattcacgctgaagttccaagtgcgctggaatcttattttcaagaggtcggacgcgca
ggacgtgacggccaggaatcttcttgtcacttgttgtacgatcaagacgacgttagcatt
caaatggagtttttgaagtggtctcatcctgagcccgagttcattcgtaaagtgtatcaa
cttatcgatgaaaatcgcttgcgcgtaaatcaagaaaaatttgatttcttgcgcgaacaa
atgaatttcaaaaaccgtcgcgacttccgcgttgaagctgcggtgagtattttagaacgt
tggggttgtttggaaaaatcagatgatccattcccattccaatgtgttcacgaacctact
gatgaacagtttgccgcagaaaacggaccccagattttgcgtgcacaaaattccaaactg
cttgagatggttcgttgggcgacgcaagataaagagtgtcgcatgaattacatctatcac
tactttgggcataagcatgagaccccatgtggtaaatgtgattggtgtcgaagtcaggtt
taa
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