Bdellovibrio sp. NC01: DOE51_05295
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Entry
DOE51_05295 CDS
T06360
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
bdc
Bdellovibrio sp. NC01
Brite
KEGG Orthology (KO) [BR:
bdc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bdc01011
]
DOE51_05295
Enzymes [BR:
bdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DOE51_05295
Peptidoglycan biosynthesis and degradation proteins [BR:
bdc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DOE51_05295
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GFIT
Motif
Pfam:
LysM
SLT
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
QDK37049
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Position
1084906..1086477
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AA seq
523 aa
AA seq
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MRRLLTLSVILALLAGCAHKDLGKTTNAADADVEIKDISSFRLSDPEGPKVVDQELETIP
TEVNPLVEKWITYFQGRGREHMEKYLARSSRYEKLMKKVLRDNGLPEDLFYIALIESGFS
SAATSHAAAVGYWQFIRGTGKRYGLEISPFVDERRDPVFATQAAAEYFKGLYSVFGSWYL
AMASYNVGENRVKREVMNHYTRDFWELARKNRLPKETINYVPKFIAAKLIAKDPAKYGFE
DIDYLPPIEFDHITVAKATNLRQMAEKMNLNYEDFKALNPKFKGEVATLKGKELVLRIPP
GTNEAAVVAANEAAVSDVQFIADSGDTQKYKIRRGDNLKTIARRYRTSVAYLRDLNDLPR
KTRLTVGMSIYVPDRTPLKDRSDRKTTATQVAKRDGGRTSPAPAAVDTQGGRFHIVQSGD
SLFTIAQKYSTTVSELQSLNNIKRRSKLKLGMKLKLPGANSSSSREVAKNKVHVVKKGES
LTDIASKYNVTLTKLQARNKIRNPSSLLVGARIMIPVAEANDN
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaggagacttttaacattgagtgtgatcctggccttattggcaggatgcgcccacaag
gatttgggcaaaactacaaacgcggcggacgcggatgtcgagattaaggacattagctcg
ttccgtttgtcagacccagaaggtcctaaagttgttgaccaagagttggaaactattccg
actgaagttaatccgcttgttgaaaaatggatcacttacttccaaggccgcggtcgcgag
cacatggaaaaatatctagcacgctcttctcgttatgaaaaattgatgaagaaggttttg
cgcgacaacggtcttcctgaagatcttttctacatcgctttgattgaatctggtttttct
tcagcagcaacgtcacatgcagcagcagtgggttactggcaattcatccgtggcacaggt
aaacgctacggtttggaaatcagtccgttcgtggatgaaagacgtgaccctgtattcgcg
actcaagcagctgctgaatacttcaaaggtttgtacagcgtattcggttcttggtatttg
gcgatggcttcatacaacgttggtgaaaaccgcgtaaaacgtgaagtgatgaaccactac
actcgtgatttctgggaacttgctcgtaagaacagacttccaaaagaaactatcaactac
gtgccgaaattcatcgctgcaaagttgatcgcaaaagatccagctaaatacggcttcgaa
gacatcgattatcttccacctatcgagttcgatcacatcactgtagctaaggcgacaaac
ttgcgccaaatggcagagaaaatgaatttgaactacgaggacttcaaagcattgaatcct
aagttcaaaggtgaagtagcgacattgaagggtaaagaacttgttcttcgtatccctcca
ggaactaacgaagctgcggttgttgccgctaacgaagcagctgtaagtgatgttcaattc
atcgctgactccggtgacacacaaaaatataaaatccgtcgtggcgataacttgaaaaca
atcgctcgtcgttaccgtacttcagtggcttaccttcgtgacctgaacgacttgcctcgc
aaaactcgtttgactgttggtatgtctatttacgttccggatcgtactccgctaaaagat
cgttcggatcgtaaaacgacagcaacacaagttgcgaaacgtgatggtggcagaacttct
ccggctccagcagctgttgatacacaaggtggccgtttccatatcgtgcaatcgggtgac
tctttgttcacgatcgcacagaagtactcaacaacagtttctgagcttcagtctttgaat
aacatcaaacgccgtagcaaattgaaattgggtatgaagttgaaactgccaggtgcgaat
tcttcttcatctcgtgaagttgcgaagaacaaagtgcatgtcgtaaaaaagggcgagagc
ctgacagacatcgcatcgaagtacaacgtgacactgacgaagcttcaggctcgcaataaa
attagaaatccttcctcgttgctggttggcgcgagaatcatgattccggtcgcagaagcg
aacgataactaa
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