Bdellovibrio sp. NC01: DOE51_12040
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Entry
DOE51_12040 CDS
T06360
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
bdc
Bdellovibrio sp. NC01
Brite
KEGG Orthology (KO) [BR:
bdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdc03016
]
DOE51_12040
Enzymes [BR:
bdc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
DOE51_12040
Transfer RNA biogenesis [BR:
bdc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
DOE51_12040
Prokaryotic type
DOE51_12040
BRITE hierarchy
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GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
QDK38258
LinkDB
All DBs
Position
2487707..2488549
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AA seq
280 aa
AA seq
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MSVKAGEAWSYQKYKFHGLSLSGIRTAIAMPELSLSFDVAQGFPYLLNLKHFFITHGHLD
HAAGIPYIISQKAMTSQEAAKFYMPKSLVEPMDQIMKIWEKIEGHQYKYEFIAVEADQEF
QLNPQCYVKAFPTTHRVESFGYTVFETHKKLKAELQGLTQEQIIELRRKGEDVNEILHVP
AVSFTGDTQIEFLDSRDWVRKSKVLLLESTYIDDRKTIESARQWGHTHIEEIIPRLKDIE
SEKIVLIHVSSRYTDYDIQKMIDDKIPKEFQDRVVFFPGR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgaaagccggcgaagcttggagttatcaaaaatacaagtttcacggtctttca
ctttcgggcatccgcacagccatcgcgatgccggagctgtcactcagcttcgatgtcgcc
caaggcttcccgtatcttttgaacctaaaacatttctttatcactcacggtcacctagac
catgctgccggcattccctatatcatttcgcaaaaggcaatgaccagccaagaggccgcg
aagttttatatgccaaagtctttggtggaaccgatggatcagatcatgaagatttgggaa
aagatcgaaggtcatcaatacaagtacgagttcatcgcagttgaagccgatcaagaattt
cagctcaatccgcaatgctacgtgaaagcctttcccaccactcaccgcgtggaatcgttc
ggttacactgtctttgaaacccacaaaaaacttaaagcagaacttcaaggactcacacaa
gagcagattatagagcttcgccgcaagggtgaggatgttaatgagatacttcatgttcca
gccgtaagcttcacgggtgacactcaaatcgaattccttgattctcgtgactgggttcgc
aaatcaaaagtacttctactggaatcaacttacatcgatgatcgcaagaccatcgagtcc
gcacgccaatgggggcacacccatatcgaagagatcatcccaagattgaaagatatcgaa
agtgaaaagatcgtcttgatccacgtttcaagtcgttacaccgactacgacatccaaaaa
atgatcgacgataaaatccccaaagaattccaagaccgcgtggtcttcttccccggccgc
taa
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