Bdellovibrio sp. NC01: DOE51_12405
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Entry
DOE51_12405 CDS
T06360
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
bdc
Bdellovibrio sp. NC01
Pathway
bdc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DOE51_12405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdc03400
]
DOE51_12405
Enzymes [BR:
bdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DOE51_12405
DNA repair and recombination proteins [BR:
bdc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DOE51_12405
RecFOR pathway proteins
DOE51_12405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
nSTAND3
AAA_16
AAA_22
AAA_14
RNA_helicase
Sigma54_activ_2
NB-ARC
Rad17
AAA_3
AAA_2
AAA_24
TsaE
AAA_18
NTPase_1
MCM
NACHT
ABC_tran
NPHP3_N
DUF815
AAA_28
IstB_IS21
AAA_17
HerA_C
AAA_33
Motif
Other DBs
NCBI-ProteinID:
QDK38322
UniProt:
A0A514WXT2
LinkDB
All DBs
Position
complement(2571123..2572157)
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AA seq
344 aa
AA seq
DB search
MSRILEGSLMDSDMTDNVSSGGGEKAWENELRPHDFSAFAGQDIVKDKIKVFVAAAKLRQ
EPLDHVLLSGPPGLGKTTLAQIIANDLGSDIKMTSAPAIDKKGDLAAILTSLKPNSVLFI
DEIHRLSRHVEEYLYTAMEDYYIDIVTGDGLGARSMKFQLAPFTLVGATTRAGLLNPPFR
DRFGIVERLQFYDKAALQKILMRSAEILKVEMDEQGAAEVARRSRGTPRIANRLLKRVRD
YAQVKGNGRITQEIAIYALNQLGVDHYGLDLMDRRILSLISEKYSGGPVGIDTIAAALSE
ERDTLEEVYEPFLIQEGFIQKTPRGRVITEFAKNTLMESIDLDK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcattctagaaggcagtctcatggacagtgatatgacggataacgtaagctct
ggcggtggcgagaaggcgtgggagaatgaattacgtccccatgatttttcggcatttgcg
ggtcaggacattgttaaagataaaatcaaagttttcgtggcggcagcaaaactccgtcaa
gaacctttggatcacgtgttgttaagcggtcctccgggcttgggtaaaacgacacttgcg
cagatcatcgcgaacgatttgggttctgatatcaaaatgacgtcagcaccggcgatcgat
aaaaaaggcgatttggctgcgatcttaacttcattaaaaccaaactcggtcctattcatt
gacgagattcatcgtctcagtcgtcacgttgaagagtacttgtacacggcgatggaagat
tattacatcgacatcgtgacaggtgacggcctgggcgcgcgttcaatgaaattccaattg
gcaccatttacgttagttggcgcgacgacgcgtgcgggtttattgaatcctccattccgc
gatcgtttcggtatcgttgaacgtctgcagttttatgacaaagcagcgttgcaaaaaatc
ttgatgagatccgcagaaattctcaaagtggaaatggacgagcagggcgctgcggaagtg
gctcgccgttcgcgtggaactcctcgtattgcgaatcgtttgttaaaacgtgtgcgtgac
tatgcacaagttaaaggaaatggtcgcatcactcaggaaatcgcgatttatgctcttaat
cagttgggtgtggatcattatggtctggaccttatggaccgtcgtattttgagtctaatc
tcagaaaaatatagtggtggccccgtaggaattgatacaatagctgcggcccttagtgag
gaacgtgacacgctcgaggaagtgtatgagcccttcttgattcaagaaggcttcattcag
aagactccacgcggtcgtgtgatcactgaattcgccaagaatacacttatggaatctatc
gacttggataagtag
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