Bdellovibrio sp. NC01: DOE51_15605
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Entry
DOE51_15605 CDS
T06360
Name
(GenBank) HD family phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bdc
Bdellovibrio sp. NC01
Brite
KEGG Orthology (KO) [BR:
bdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdc03019
]
DOE51_15605
Messenger RNA biogenesis [BR:
bdc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DOE51_15605
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
QDK38908
UniProt:
A0A514WZH7
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Position
complement(3234398..3235360)
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AA seq
320 aa
AA seq
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MDKKTVHSLQDKDNVDHLFLVKEKTVATGKNGRPFMGLQLGDATGNIDARLWDRVEELSR
EFEIGDILKVKGQVQLFQNRKQLIVHRLERVDSSTVNFEDFIPKTSRNSEDMLAELTVLV
RSMKNDNLRQLILDTLEDPEIRPKLMRAPAAKSIHHAWIGGLLEHILSIAKIMDFMGNHY
PFLNRDLLLFGAIYHDIGKIWELSYDNGISYTNRGRLIGHMEIACELIDKKASRILGFSE
ELRDICKHIILSHHGKLEYGSPKRPKFLEAMVIAMVDDFDSKVATLKTLIEAERGSGEKW
SRYNELFDRYFLLDDLNEKF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaaaccgttcacagccttcaagacaaagacaatgtcgatcacttgttctta
gttaaagaaaagacggtggccactggtaaaaatggccgaccatttatgggtctgcaatta
ggtgatgccactggcaacatcgatgctcgtttgtgggaccgtgttgaagaactttctcgc
gaatttgaaattggcgatattttaaaagtaaaaggccaagttcaacttttccaaaatcgc
aagcagttgatcgtgcatcgcttagagcgtgtcgattcttcgactgtaaattttgaagac
tttattccaaagacatcacgcaattctgaagacatgttggcagagctgactgtccttgtg
cgttcgatgaagaacgataatcttcgtcagttaattttagacactttggaagatccagaa
attcgcccgaaactgatgcgtgctccagcagcgaaatcaatccatcacgcgtggattggt
ggtttgcttgaacatatcttgtcgattgcgaagatcatggattttatgggcaaccattat
ccattcttgaatcgtgatttgcttttattcggcgcgatctatcacgatatcggtaagatc
tgggaactgtcttacgacaacggaatttcatacacaaatcgggggcgcctgattggtcac
atggaaattgcttgtgaactgatcgataaaaaagcgtcacgcattttggggttcagcgaa
gagcttcgcgatatctgtaaacatattattttaagtcaccacggaaaactggaatacggt
tctccgaagcgtcctaaattcctagaggcgatggtgattgcaatggtcgacgactttgat
agcaaagttgcgacgttaaagacactgatcgaggccgaacgtggttccggcgagaaatgg
tctcgctataatgaactcttcgaccgttatttcctactcgatgatctgaatgagaagttt
taa
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