Bdellovibrio sp. NC01: DOE51_15700
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Entry
DOE51_15700 CDS
T06360
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bdc
Bdellovibrio sp. NC01
Brite
KEGG Orthology (KO) [BR:
bdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdc03400
]
DOE51_15700
Enzymes [BR:
bdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DOE51_15700
DNA repair and recombination proteins [BR:
bdc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DOE51_15700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
Carbpep_Y_N
EF-hand_7
Motif
Other DBs
NCBI-ProteinID:
QDK38927
UniProt:
A0A514X0C0
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Position
complement(3261515..3264241)
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AA seq
908 aa
AA seq
DB search
MLHILSIENRSQVNELFAKYNPREQSWLVSDLRTKFELQQKILARDGQYIDESVLRASDL
WKMLLKRLEPRLRLVSDPFARSLLRTIMDDNADVLGVNSSAEDTVFSYIDQLAAIIFHPD
GSKRLDEWFETHEEAKNRWRDWYLRARFCAIKLIEEYNVITSDWITSYLQNFNELERVWN
IPLIVDLSGEISRVEAEILRVISRSIDVIVLEPSPEWRKDFHFLLRPYEDLRGQAASVGK
LQPVAKTEKKTDVLRFSGMLAEIKNSVGQAREWLSSGIEALSIAIVAPDIETYWPVLQSF
LAEEGIPYQKDITHKAQSLPSVTRWLATLRSKSGRLSSSDLEISFFDKHESQQVRYEEFK
ALFKSLYVNEDLARNEIVHKIFSDQLDVTGLVTRDEFVLKALSYWNSNETEIVQLVLREL
LQNATANTKLIWKEWLSYLESIVAAKEFSLEKGEPSGILVTKLMSAHSEKALYRIFLGMT
DEALKVKNKTQLSGQDYFELAKDIGFYLDNPDQSDLEFELRLLAEANSKYDIYCFGATDL
SGSLCSPSTFWMSLSGEDHEHLTLPKETRWDELQYSELASGRQWLDARRSEVEARIDMDL
GHQPTPAIVLKDLPRISASAIESFLECPFIFAAQRYFKLKDLPDIDLDVDHRTRGQLAHA
LFERLTIEPMRFDWTVSELDELLESARKEKELIFADERLWQPLKKKHIQLGTRFLDFEKK
WREEFKKTKTLAREKRFEFYLDPKTEELSREPIAGGFRISGQIDRIDGNDQKHLIVLDYK
SSAGGITSHSSWLKNNQLQLLFYMWVLEKALMEDVKGEVIGLFYYIFRTFDRKGFKIEDL
AGHLYPASKRKDKNATFEAKELYLTEFSKVLMMTLDRIRQGEVSPVPADDQTCNTCEWRR
QCRAPHLN
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatatcctttccatagaaaatcgctcgcaagtcaacgagctgttcgcgaaatat
aatccgcgtgaacaatcatggcttgtttctgacttgcgcacgaagttcgaacttcagcaa
aaaattcttgctcgcgatggtcaatacatcgacgagtcagttctacgtgccagtgactta
tggaagatgttgttgaaacgtcttgagccccgcttgcgactggtcagtgatccgttcgcg
cgttcgttattacgcacgatcatggatgacaatgcggatgtgctgggtgtgaactcttct
gctgaagacactgttttttcctacattgatcaattggcggccatcattttccatcccgat
ggcagtaagcgtttggatgagtggtttgaaactcacgaagaagcaaagaatcgttggcgc
gattggtatttgcgcgcgcgtttctgtgcgatcaagttgattgaagaatacaatgtcatc
acttcggattggatcacttcgtacttacaaaacttcaacgaacttgaaagagtttggaat
attcccctgatcgttgacctaagtggagagatctcacgcgttgaagccgaaatcttgcgc
gtgatttcacgttcgattgatgtgattgtgttagagccttctccggaatggcgtaaagac
ttccacttcttgcttcgtccttacgaagatctgcgtggacaagcggcaagtgttggaaag
ttacaacctgtcgctaaaacagaaaagaaaacggacgttttgcgtttttctggaatgctt
gcagagattaagaactctgtcggtcaagcccgtgaatggttaagttctggcattgaagcc
ttatctattgcgattgtggctcctgatatcgaaacatactggccggttctgcaatcattc
ttggctgaagagggtattccttatcaaaaagatatcactcacaaagcgcaaagtttgccg
tctgtgacaagatggcttgcgaccttacgttcaaaaagtggtcgcttgtcttcttcggat
ctggaaatttcattctttgataaacacgaatcgcaacaagtacgttacgaagaatttaaa
gccttgtttaaaagtctttatgtgaatgaagacttagctcgtaacgaaattgtgcataag
atctttagcgatcagttggatgtcacaggtcttgtgactcgtgatgagttcgttttaaaa
gctctgagctattggaattccaatgaaacagaaatcgtgcaattggttttgcgcgaactt
ctgcaaaatgcaacagccaacaccaagctgatttggaaagaatggctgagctatcttgaa
agcattgttgcggcaaaagaattctctttagaaaaaggggagccctctggaattcttgtg
acaaagcttatgtctgcgcacagtgaaaaagcgttgtatcgaattttcctgggcatgaca
gacgaagcattgaaagtgaaaaacaaaactcaactttctggccaagattattttgagtta
gcgaaagacatcggtttttatctggataatccggatcaaagcgatctggaatttgaattg
cgcctgttggctgaagcgaactctaaatacgatatctattgctttggcgcgacggactta
agtggttctttgtgttcgccttccactttctggatgagtttaagtggtgaagaccatgaa
catctgactttgccgaaagaaactcgttgggatgaattacaatattcagaacttgcgtcg
ggccgtcagtggttggatgcacgtcgttctgaagttgaagcgcgtattgatatggattta
ggtcatcaacccacgccagcaattgtgcttaaggatttaccgcgtatttcagcgtcagcg
atcgaaagcttcctggagtgtccgtttatctttgcggcacaacgatatttcaaattaaaa
gatcttcctgatatcgatttagatgttgatcatcgtactcgcgggcaattagcccatgcc
ttgtttgagcgtctgacgatcgaaccgatgcgttttgattggaccgtcagcgagcttgat
gaattattagaatcagcacgcaaagaaaaagaattaatctttgctgatgaacgcctgtgg
cagccgcttaagaaaaagcacattcaattgggcacacgtttcttagattttgaaaagaaa
tggcgtgaagagttcaagaagactaaaacgttagcgcgtgaaaaacgttttgagttttat
cttgatcccaaaaccgaagagctaagccgtgaacccattgcggggggctttagaatctcg
ggacagatcgaccgtattgatggcaacgatcagaaacatcttattgttctggattataaa
tcgtcagcgggtggtatcacgtcacattcttcttggcttaaaaacaatcaactgcaatta
cttttctatatgtgggttttagaaaaggccctgatggaagacgttaaaggcgaagtgatt
ggtttgttctattatatcttccgtacatttgatcgtaagggttttaaaattgaagatttg
gcaggacatctgtatccggcttcaaaacgcaaagataaaaatgcaacctttgaagccaaa
gaattgtacctgacagagttttcaaaagttttgatgatgaccctagatcgcatccgtcaa
ggtgaagtcagtccggttccagctgatgaccaaacctgcaatacctgcgagtggagaagg
caatgtcgagcgccacatctgaattaa
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