Bdellovibrio sp. NC01: DOE51_17140
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Entry
DOE51_17140 CDS
T06360
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bdc
Bdellovibrio sp. NC01
Pathway
bdc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DOE51_17140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdc03400
]
DOE51_17140
Enzymes [BR:
bdc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DOE51_17140
DNA repair and recombination proteins [BR:
bdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DOE51_17140
Prokaryotic type
DOE51_17140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
OB_SHLD2_2nd
Motif
Other DBs
NCBI-ProteinID:
QDK39191
UniProt:
A0A514X086
LinkDB
All DBs
Position
complement(3575984..3576670)
Genome browser
AA seq
228 aa
AA seq
DB search
MEQIKSEVKLHSSWKQKLQPEFDKDSMVKLNAFLKKENAAGKVIYPSHDDYFAALNLTPL
DRVKVVIVGQDPYHGPGQAHGLCFSVQDGVRFPPSLKNIFKELHSDLGIEIPKSGSLKKW
AEHGVLLLNAVLTVEDGKAASHQGKGWEEFTDKVIHIVNEEKEHVVFILWGSYAQKKAAF
VDRKKHFVIESVHPSPLSAHRGFFGTKPFSRANAYLRSQGISEVDWSL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaatcaaaagcgaagtaaaattacattcttcttggaaacaaaaactgcaaccg
gaattcgacaaagattcaatggtgaagttgaatgcatttctcaaaaaagaaaatgcagca
ggtaaagttatttatccaagtcatgacgattatttcgcagcgttgaatttaactccgctt
gatagggtgaaagttgttatcgtagggcaagatccttatcatggccctggtcaagcgcat
ggactttgtttttctgtgcaagatggcgtgcgtttccctccgtcgctgaaaaatatattt
aaagaactgcattcggatcttggcatcgagattccaaaatcaggttcattaaaaaagtgg
gccgagcatggcgtgttgttgttgaatgcagttctgactgttgaggacggcaaagcagct
tcgcaccaaggtaaaggctgggaagagttcactgacaaagtgattcacatcgtgaatgaa
gaaaaagaacatgtggtgtttattttgtggggctcgtacgcgcaaaagaaagcagcgttc
gttgatcgcaagaaacattttgttatcgagtcggtgcatccgtcaccactgtctgcgcat
cgcggattcttcggtaccaaaccattttcacgagcgaatgcttacttaagatcccaaggc
atttcagaagtggattggtctctttaa
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