Bdellovibrio sp. NC01: DOE51_17275
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Entry
DOE51_17275 CDS
T06360
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
bdc
Bdellovibrio sp. NC01
Pathway
bdc00541
Biosynthesis of various nucleotide sugars
bdc01100
Metabolic pathways
bdc01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
bdc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DOE51_17275 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bdc01005
]
DOE51_17275 (rfaD)
Enzymes [BR:
bdc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
DOE51_17275 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
bdc01005
]
Core region
DOE51_17275 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
Sacchrp_dh_NADP
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
QDK39215
UniProt:
A0A514X0G3
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All DBs
Position
3600181..3601149
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AA seq
322 aa
AA seq
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MIIVTGANGFIGSVMVWQLNQKGVTDIVAVDTVSLKERDLLKKRQYSKFLLKDELWPFLE
TEEAKSKVTWIIHMGACSSTTETNKEFLWENNTYYTQRIFEWCTQYGKSMIYASSAATYG
AGELGFDDTTDPELLKPLNLYGESKVLFDRWALKQTKTPPHWYGLKFFNVFGPNEHKKEA
MASVVFKAFNQIKESGSLGLFKSANPKYKDGEFMRDFVYVKDVTGWMAELMDKMPKNGVY
NMGFGQPRTWLDLANATFKAMNKDTKINWLEMPENIRGQYQYYTEAKTDKWLAAGMSPAK
WPLEKAVTDYVQNYLSKEDPTL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtaactggcgcgaatggttttattggaagtgtgatggtatggcaactcaac
caaaaaggagttaccgacatcgtggctgtggacactgtttctttgaaggaaagagacctt
cttaagaaacgtcagtactcaaaatttcttttgaaagatgagttgtggccattccttgaa
actgaagaagcaaaatctaaagtcacgtggatcatccacatgggtgcatgctcttcaacg
acagaaacaaacaaagaattcttgtgggaaaataacacttactacacacaaagaattttt
gaatggtgtactcagtacggtaaatcaatgatctacgcttcaagtgctgcaacatacggc
gctggcgaacttggctttgacgacacaacagatcctgaattgttgaaaccgttgaatctt
tacggcgaatcgaaagttttgttcgatcgttgggctttgaaacaaactaaaactcctcca
cactggtatggcttgaaattctttaacgtgtttggtccgaacgaacacaaaaaagaagcg
atggcttccgtggtattcaaagctttcaaccaaatcaaagaatctggttcattgggctta
ttcaaatctgcaaatccaaaatacaaagacggcgaattcatgcgcgacttcgtttacgtg
aaagatgtcacaggttggatggcagagctgatggataaaatgcctaagaatggcgtttac
aacatgggcttcggtcaaccgcgtacatggttggatcttgctaatgcaactttcaaagcc
atgaacaaagacacgaaaatcaactggctagaaatgccagaaaatattcgtggtcaatat
cagtactacacagaagcaaaaacagataagtggttggcagcaggcatgagccccgctaaa
tggccgcttgaaaaagcagtgactgattatgtgcaaaattatctctcaaaagaggaccca
actctttaa
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