Bifidobacterium dentium Bd1: BDP_0006
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Entry
BDP_0006 CDS
T01143
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bde
Bifidobacterium dentium Bd1
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bde03032
]
BDP_0006 (gyrA)
03400 DNA repair and recombination proteins [BR:
bde03400
]
BDP_0006 (gyrA)
Enzymes [BR:
bde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BDP_0006 (gyrA)
DNA replication proteins [BR:
bde03032
]
Prokaryotic type
DNA Topoisomerases
BDP_0006 (gyrA)
DNA repair and recombination proteins [BR:
bde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BDP_0006 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FUSC
Motif
Other DBs
NCBI-ProteinID:
ADB08705
UniProt:
D2Q6I3
LinkDB
All DBs
Position
7216..9885
Genome browser
AA seq
889 aa
AA seq
DB search
MADENNNNEEGQFVPDGSMEPLSPQEADNTDYGLMTGERIQKKDLRQEMRDSYLSYAMSV
IVDRALPDVRDGLKPVHRRVIYAMYDGGYRPDRGYSKCARVVGEVMGKYHPHGDSAIYDT
LVRMAQSWSMRYMLVDGQGNFGSPGDDPAAAMRYTECRMAPLAMEMVRDIDKDTVDFLPN
YDGKTQEPTVLPARFPNLLCNGSSGIAVGMATNIPPHNMREVAEGVHWALDHPEASREEL
LDNLIRIIKGPDFPTGATILGHKGIEQAYRTGRGLITMRAVVNTEEIKGRMCLVITELPY
QVNPDRLVVSIREAVRDGKIQGIADMRDETSGRTGQRLVLVLKRDAVPKVVLNNLYKHSQ
LQQTFGANMLALVDGVPRTLSLDAFIRHWVSHQLDVIARRTAYLKREAEERDHILQGYLK
ALDMIDEVIALIRASESAETARTGLMDLLDVDEVQADAILAMQLRRLAALERQKILDEHN
ELMRKIADYNDILAKPERQRKIVGDELDEIVAKYGDERRTRILPYSGEMNVEDLIAEENV
VVTVTHSGFIKRTKADEYRAQHRGGKGIKGAKLREDDVVDHFFLTSTHNWLLFFTNKGRV
YRLKAYELPEGSRDSKGQHVANLLQFGPDEAIQTVLSIPNYEVAKYLVLATRSGKVKKTA
LAEYDSPRQGGLIAVRLMTDENGENADELIGAALCNAEDDIILVSKLGMSLKFQADDEQL
RPMGRQTAGVQGMKFREGDELLAMDVVWGDSDKDLLVVTNEGFAKRTAISEYRLQGRNGY
GVKAVQLAEGRGSLVGAVIVEEDDQVMAIMKSGKVIRSNVAEVKRTGRNTQGVTLAKPDK
NDEIISIARNEEKENEDDEPAEGAPAEAVDGQAVTTQSGENVEASAKTE
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
ttggcagacgaaaacaacaacaacgaagagggccagttcgtgcctgacggctccatggaa
ccgctaagcccgcaagaggccgacaacaccgattacggcctgatgaccggcgaacgcatc
cagaagaaggacctgcgtcaggaaatgcgcgactcctatctgtcgtacgccatgtcagtg
atcgtggaccgtgcattgccggacgtacgcgatggcctgaagccggtgcatcgtcgcgtg
atctacgcgatgtacgacggcggataccgccccgatcgtggctattccaagtgcgcccgc
gtggtcggcgaggtcatgggtaagtaccatccgcacggcgattccgccatctacgacacc
ttggtgcgtatggcgcagtcctggtcgatgcgctacatgctcgtcgatggacaaggcaac
ttcggctcccccggcgacgatccggcagcggcaatgcgttacaccgaatgccgtatggcg
cctcttgccatggagatggtgcgcgatatcgacaaggacaccgtcgacttcctaccgaac
tacgatggtaagacccaggagccgaccgtgctgccggcccgcttcccgaacctgctctgc
aatggatcgtccggcatcgccgtcggcatggccaccaatatcccgccgcacaacatgcgt
gaggtggccgaaggcgtgcattgggcactggaccatccggaagccagccgcgaagaactg
ctcgacaatctgatccgcattatcaaggggccggatttccctaccggtgcgacgattctc
ggtcacaagggcatcgaacaggcctaccgtaccggtcgaggcctgatcaccatgcgtgcg
gtcgtaaacaccgaggaaatcaagggccgcatgtgcctggtgatcaccgaactgccatat
caggtgaacccggatcgactggtcgtatccatccgtgaagcggtgcgtgacggcaaaatc
caaggcattgccgatatgcgtgacgaaacctccggacgtaccggtcagcgactcgtgctc
gtactcaagcgtgacgccgtgccgaaggtggttctcaacaatctgtataagcactcgcag
ctgcagcagactttcggtgccaacatgctggcactggtcgacggcgtgccgcgtacattg
agcttggacgcgttcatccgccactgggtgagccatcagcttgacgtgatcgcacgtcgt
accgcatacctcaagcgtgaggccgaggagcgcgaccacatcctgcagggctatctgaag
gcccttgacatgatcgatgaggtgatcgccctcattcgcgcctccgaatccgctgagacc
gcccgtacgggccttatggatctgcttgatgtggatgaggtgcaggccgacgccattctg
gccatgcagctacgccgactggccgcattggaacgtcagaagatcctcgacgagcacaat
gagctcatgcgcaagatcgccgactacaacgacatcctcgccaagccggaacgccagcgc
aagatcgtgggtgacgaactcgacgaaatcgtcgccaagtacggcgatgaacgccgcacc
cggattctgccatactccggcgaaatgaacgtcgaagacctgatcgctgaagagaacgtg
gtcgtgaccgtgacccattccggcttcatcaagcgcaccaaggccgacgagtaccgtgcg
cagcaccgtggcggtaaaggcatcaagggcgccaagctgcgtgaggatgacgtggtcgat
cacttcttcctgaccagtacgcacaactggctgctgttcttcaccaacaagggtcgcgta
taccggctgaaggcctacgagctgccggagggatcgcgcgattccaaggggcaacatgtg
gccaacctgctgcagttcggtccggatgaggccattcagaccgtattgtcgattccgaac
tacgaggtggccaagtatcttgtgcttgccacccgttccggcaaggtcaagaagaccgcg
cttgccgaatacgactcccctcgtcaaggtggtctgattgcagtgcgattgatgaccgac
gagaacggcgagaacgccgacgagctgattggcgctgcactgtgcaacgccgaagacgac
atcatcctcgtctccaagctgggcatgagcctgaagttccaggccgatgacgagcagctg
cgtccaatgggccgccagaccgcaggtgtgcagggcatgaagttccgcgaaggcgacgag
ctgctggccatggacgtggtctggggcgattccgacaaggatctgctcgtggtcaccaat
gaaggcttcgccaagcgtacggccatcagcgaatatcgtttgcaaggccgtaacggctac
ggcgtcaaggccgtgcagttagccgagggccgtggctccctggtgggcgccgtgatcgtg
gaggaagatgaccaggtcatggccatcatgaagtccggcaaggtcatccgttccaacgtc
gccgaagtcaagcgcacgggccgcaacacccaaggcgtaacgctcgcgaagcccgacaag
aacgacgaaatcatctccatcgcccgtaatgaggagaaggagaacgaagacgatgagcca
gccgaaggagcccctgcggaagcggtggacgggcaggccgtcaccactcaatcaggcgag
aatgtagaggcctcggccaagaccgagtaa
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