Bifidobacterium dentium Bd1: BDP_0251
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Entry
BDP_0251 CDS
T01143
Name
(GenBank) DNA polymerase III subunit delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bde
Bifidobacterium dentium Bd1
Pathway
bde03030
DNA replication
bde03430
Mismatch repair
bde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BDP_0251
03430 Mismatch repair
BDP_0251
03440 Homologous recombination
BDP_0251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bde03032
]
BDP_0251
03400 DNA repair and recombination proteins [BR:
bde03400
]
BDP_0251
Enzymes [BR:
bde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BDP_0251
DNA replication proteins [BR:
bde03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BDP_0251
DNA repair and recombination proteins [BR:
bde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BDP_0251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_5
AAA_16
AAA_22
DNApol3-delta_C
AAA_18
NolB
KTI12
RuvB_N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ADB08931
UniProt:
D2Q7W0
LinkDB
All DBs
Position
319614..320765
Genome browser
AA seq
383 aa
AA seq
DB search
MSVWDSIVGQRQVVEQLKTVSCGDPKSIAQSWLICGPPGSGRSNVARAFAAALESPDHGL
GDEPTKVTQQVLAGTHPDVTVLATNKVTIGIDQVRDLITTSEQMPSTAPWRIIIIEDVDR
MLERTTNVLLKEIEEPSEHAIWLLCAPSAQDVLPTIRSRTRIVNLAVPSNQAVAKFLEET
SQVEPKIAARAARLAEGHIGIARLYACNERIMSDRDELIVGVLNLAKASDAVLLAGNLID
NAKAQAEADVEVKAAAAEADFRRINGLGPKDRIPPKLRGAYNAIAKKDELKRQATRLTRD
VLDRALNSVASIYRDVAVLQNNAEDAVGLINLENRSSIAELSVRLDRAAAVRRLEDIATA
RRRLNGNGNPALVFEALFCALIP
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtatgggattccatagtggggcaacgtcaggtggtggagcagctcaagaccgtc
tcctgtggcgatccgaagtcgatcgcgcaatcatggctgatctgcgggcctcccggatcc
ggccgttccaatgtggcgcgtgccttcgcggcggcgttggagagccccgaccatggcctt
ggcgacgaaccgaccaaagtcacccagcaggtgcttgccggcacgcatcccgacgtgacc
gtactcgctacgaataaggtgaccatcggcatcgatcaggtacgcgacctgatcaccacc
tccgagcagatgccgagcaccgcgccgtggcgaatcatcatcatcgaagacgtggaccgt
atgctcgaacgcaccacgaatgtgttgctgaaggagattgaggagccgagcgaacatgcc
atctggctgttgtgcgccccgagtgcgcaagatgtgctgccgaccatccgttcacgcacc
cgtatcgtgaatcttgccgtgccgtcgaaccaagccgtggcgaaattcctcgaggagact
tcgcaggtcgagccgaaaatcgcggcccgtgcggcgcgccttgccgaagggcatatcggc
atcgcccgactgtacgcctgcaacgagcggatcatgtcggatcgtgatgagctgatcgtc
ggcgtgctcaatcttgcgaaggcatccgatgcggtgttgctggccggcaatctcatcgac
aatgcgaaagcgcaggccgaggcggatgtggaggtcaaagccgccgccgcggaagccgat
ttccgtagaatcaacggacttggtccgaaggaccgcattcctccgaaattgcgcggcgcc
tacaacgccatcgccaaaaaagacgagctcaagcgtcaggccacgcgcctcacgcgtgac
gtgcttgaccgcgcactcaactcggtggcgagcatctaccgtgatgtcgccgtgttgcag
aacaacgccgaggatgccgtcggcctgatcaatcttgagaaccgctcctcgatcgccgaa
ctgtcggtgcgtctggatcgcgccgcggccgtacgtcggctggaggatatcgctacggcc
cgcaggcgtctcaacggcaacggcaatcccgcgttggtgttcgaagccttgttctgcgcc
ctgattccgtaa
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