Bifidobacterium dentium Bd1: BDP_0457
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Entry
BDP_0457 CDS
T01143
Symbol
polA
Name
(GenBank) polA DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bde
Bifidobacterium dentium Bd1
Pathway
bde03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BDP_0457 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bde03021
]
BDP_0457 (polA)
03400 DNA repair and recombination proteins [BR:
bde03400
]
BDP_0457 (polA)
Enzymes [BR:
bde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BDP_0457 (polA)
Transcription machinery [BR:
bde03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BDP_0457 (polA)
DNA repair and recombination proteins [BR:
bde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BDP_0457 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
ADB09132
UniProt:
D2Q8J6
LinkDB
All DBs
Position
541304..542299
Genome browser
AA seq
331 aa
AA seq
DB search
MLIAQRPTLTEESLNPQRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRISGVP
HEFTTLPGVEEDVTEILLNIKGIVLTSEYDEPVVMYLRKSGKGEATAGDITPPAGVTIAN
PDMHIASLADDGELEIEFTVERGRGYVPAQMNKQDNAEIGRIPVDSIYSPVLKVSYRVEA
TRVEQRTDFDKLILDVETKPAISPRDAVASAGSTLVELFGLCRELNTQAEGVEVGPAPVA
EETNPEMAVPIEDLNLTQRSYNCLKREGIHTIGELVAHTEQDLLDIRNFGMKSIDEVKEK
LQALGLALKASPLGFDANNLEGGTFFSPEDE
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgcttatcgcacagcgtccgacacttaccgaggaatctctcaaccctcagcgttcccgc
ttcaccatcgagcctctcgagcctggtttcggctacacgcttggcaactcgctgcgccgt
accctcctgagctccattcctggagcggctgtgacttcggtgcgtatctccggcgtcccg
catgagttcaccactctgccgggtgttgaagaggacgttaccgagatcctgctgaacatc
aagggcatcgtgctcaccagcgaatacgatgagccggttgtcatgtatctgcgcaagagc
ggcaagggcgaagccaccgcgggtgatatcaccccgccggccggcgtcaccatcgccaac
ccggatatgcatatcgcgtccctcgccgatgatggcgaactcgagatcgagttcaccgtc
gagcgtggccgcggttacgttcccgctcagatgaacaagcaggacaacgccgagatcggc
cgtatcccggttgattcgatttactccccggtgctcaaggtgagctatcgcgtggaagcc
acccgcgttgaacagcgcactgacttcgacaagctcatcctggacgtggagaccaagccg
gcaatctccccgcgtgatgcagtcgcatctgctggttccaccttggtggagctcttcggc
ctgtgccgtgagctcaacacccaggctgaaggcgtcgaggtcggccctgccccggtggca
gaggagaccaacccggagatggccgttccgatcgaggacctcaacctcactcagcgtagc
tacaactgcctgaagcgcgagggcatccacacgatcggtgagctggtcgcccacaccgag
caggatctgctcgacatccgcaatttcggcatgaaatccatcgacgaagtcaaggaaaag
ttgcaggctcttggcctggctctcaaagcttcgccgctcggtttcgatgccaacaacctc
gaaggcggcaccttcttctcgccggaagacgagtga
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