Bifidobacterium dentium Bd1: BDP_0459
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Entry
BDP_0459 CDS
T01143
Symbol
rplQ
Name
(GenBank) rplQ 50S ribosomal protein L17
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bde
Bifidobacterium dentium Bd1
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bde03016
]
BDP_0459 (rplQ)
Enzymes [BR:
bde01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BDP_0459 (rplQ)
Transfer RNA biogenesis [BR:
bde03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BDP_0459 (rplQ)
Prokaryotic type
BDP_0459 (rplQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ADB09134
UniProt:
D2Q8J8
LinkDB
All DBs
Position
542987..543877
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AA seq
296 aa
AA seq
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MAYDGGGFFGWAKQPDRRTVQGEIERILHTVLRVPVDDAGEPLRLTVAGRTDTGVHASHQ
VCHLDISETILARCVGHMNVPPVVALTRRLQRMLPNDITIHGINEAPQGFDARFSALERT
YVYRIADRSSEIDPRMRGFVLHVDDDLDLETMNQAAAMTIGLHDFGSFATPNPGGTTIRE
VKTAYWRRIPQRPLVDGEMTMGERYRTPSMESGLACFTIVADAFARNMVRSLVNGCVQVG
IGKRSLDWFADKMATPLREGSTGPIAPQGLTLEHIEYPDDDQLAIRAETIRAKRTL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
ttggcatacgatggtggcggcttcttcggttgggcgaagcagcctgatcggcgtaccgtg
cagggggagatcgagcgcatactgcacaccgtgttgcgcgtgcccgtcgatgatgcgggg
gaacctctccgtctgaccgttgcgggacgtaccgataccggtgtgcacgcctcgcatcag
gtatgccatctggacatctctgaaaccatactcgcccgttgcgttgggcacatgaatgtg
ccgccagtggttgcgttgacgcgccggttgcagcgtatgctgccgaacgacatcacgatt
catgggatcaacgaggctccccaaggctttgatgcccgtttttccgcgctggaacgcacc
tacgtataccgcattgccgatcggagcagcgaaattgatccgaggatgcgcggtttcgtc
ctgcacgtcgacgacgatctggatctggaaaccatgaaccaggccgcggccatgaccatc
ggcctgcatgacttcggttcgttcgccacgccaaaccccggcggcaccaccatacgtgag
gtcaaaaccgcctactggaggcgcataccgcaacgtccgctcgttgacggcgagatgaca
atgggggagcgttaccgtacgccgtcaatggaatccggtctcgcctgcttcaccatcgtg
gccgacgcattcgcccgcaacatggtgcgatcgctggtcaacggctgcgtacaggtcggc
atcggcaaacgatccctcgattggtttgcggacaagatggccacaccgctgcgcgaaggc
tcgacgggaccgatcgcaccgcaggggctgacattggagcatatcgaatatcccgatgac
gatcagttggcgattcgtgccgaaacgattcgcgcgaaacgtaccttatga
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