Bifidobacterium dentium Bd1: BDP_0475
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Entry
BDP_0475 CDS
T01143
Symbol
radA
Name
(GenBank) radA DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
bde
Bifidobacterium dentium Bd1
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bde03400
]
BDP_0475 (radA)
DNA repair and recombination proteins [BR:
bde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BDP_0475 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_25
Zn_ribbon_LapB
DnaB_C
ATPase
ChlI
ABC_tran
Lon_C
AAA_16
DUF7125
AAA_22
NACHT
SLFN-g3_helicase
Rad51
TniB
AAA_29
EAD2
nSTAND_NTPase5
AAA
RsgA_GTPase
AAA_24
nSTAND3
NB-ARC
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ADB09149
UniProt:
D2Q8L3
LinkDB
All DBs
Position
complement(561538..562947)
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AA seq
469 aa
AA seq
DB search
MAKTSVQFLCSECGWSGPKWYGRCPECGQWGTIEEFHEARPSAASRTAAPGRTSRTQSGA
VPSSAARPITEIGTENMSRIPTGFSEFDRVLGSGIVPGSVTLIAGEPGIGKSTLLLETAG
NVAREVANHRDRNVVLYVSGEESQAQVRMRASRINAIEPNMLLAATTDLATVLGLIEQVR
PALAIVDSAQTIVSQDVDGISGGSTQVREVASALIDTAKTLDVPVLLVGHVTKDGSIAGP
RTLEHLVDVVCQFEGDAQTALRMLRAVKNRFGPTDEVGCFDMSGEGIEEVSDPSGLFLSS
NGSVPVEGTCVTFTLDGHRSLPIEVQSLVTKSVLPTPRRAANGVDSNRIAMLVAVLYRHG
GINLLANDLYISTIAGGLAKEPGCDLAIVAALASAAKSKAIARTTCAIGEISLTGQVRPV
PRLEYRLREAARLGFTTAVVPTLRKHVTVPGLTIVQADTLKDALGVLLK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagacttccgtgcagtttttgtgctcagaatgcggctggagtggaccgaagtgg
tacggccgctgcccggaatgcggccagtggggcaccatcgaggagtttcatgaggcacgg
ccttccgccgcttcccgcaccgccgcccctgggcgcacgtcgcgcacgcaatcgggcgcg
gtaccctcctccgccgccaggccgatcaccgaaatcggcacggaaaacatgtccagaatc
cccaccggcttttcggaattcgaccgtgtgctgggctccggcatcgttcccggatcggtg
acgctgatcgcaggcgagcccggcatcggcaaatcgacgctgttgctggaaacggcgggc
aatgtggcgcgcgaggtcgccaatcatcgtgaccgcaacgtcgtcctgtatgtttccggc
gaggaatcgcaggcacaggtgcgcatgcgcgcctcccgcatcaatgcgatcgaaccaaac
atgttgctggccgccaccaccgatctggctacggtattgggcctgatcgaacaggtcagg
ccggcgctggcgatcgtggattccgcacagaccatcgtttcgcaggacgtcgacggcatc
tccggcggctccacccaagtgcgcgaagtggcgagcgcattgatcgacaccgcgaagacg
cttgacgttccggtactgctggtcggccatgtcacgaaggacggttcgatcgccggaccg
cgtaccttggaacatctggtcgacgtggtgtgccagttcgaaggtgacgcccagacggcg
ctgcgcatgctgcgcgccgtgaagaaccgcttcggccctaccgacgaggtcggctgcttc
gacatgagcggcgagggcatcgaagaggtgagcgacccctccggactgtttctgtcctcg
aatggttccgttccggtggaaggcacctgtgtgacgtttacgctggacggtcacagaagt
ctgccgatcgaagtgcagtcattggtcacgaaatccgtgctgccgacaccccgacgcgcg
gcgaacggcgtagattccaaccgtatcgccatgttggtcgccgtactgtaccggcatggc
ggcatcaatctgttggcgaacgacctgtacatctccaccatcgcaggcggtctcgccaag
gagcctggctgtgatctggccattgtggcggcgttggcgagcgccgcgaaatccaaggcg
atcgcacgcacgacctgtgccatcggcgaaatctcgctgaccggccaggttcgtccggtt
ccccgtctggaataccggttgcgcgaggccgcacgactgggcttcaccaccgccgtagtg
ccgacgttgcgcaagcacgtcaccgtccccggactcaccatcgtccaagccgatacgctt
aaggacgcgctcggcgtcctgctgaaatag
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