Bifidobacterium dentium Bd1: BDP_0562
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Entry
BDP_0562 CDS
T01143
Name
(GenBank) alpha-L-arabinofuranosidase
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
bde
Bifidobacterium dentium Bd1
Pathway
bde00520
Amino sugar and nucleotide sugar metabolism
bde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
BDP_0562
Enzymes [BR:
bde01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
BDP_0562
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
Motif
Other DBs
NCBI-ProteinID:
ADB09231
UniProt:
D2Q8U5
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All DBs
Position
663726..664754
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AA seq
342 aa
AA seq
DB search
MTIAATTITNPILSGMYPDPSWIWDDLRGQVVLVNSSFECVPGLPIHVSEDLSHWSHVAD
AIDADMARRLLIPFVEDSGGVYAPTLRSIAGKYVIASTVARIDMDKAIAAGCARSELDDA
IRSAGNFIIEADAIEGPWRGPFWISGAEGIDPDVFEDRDGNVYWTQTRPAIHPQWEGQTE
IWTQRIDADSWSLLEDGAPAGRGKTIIWRGYGMEAVWAEGPHLYRIGDYVYLLTAEGGTG
FEHSEMAMRMYAPNGLAEAFAKYERMAVEVGERIPSVREGERCYLGNAIRAFHVDRKNPI
LTHRHWGMSEPVQCVGHADLLQHPQFGWWMMAGFWPNSMRGS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgacgattgcagcaacaaccatcaccaatccgattctcagtggcatgtatcccgatcca
agttggatctgggatgaccttcgtgggcaggtcgtacttgtcaattcctcattcgaatgt
gttcccggtctgccgatccatgtgtccgaagacctttcgcattggagccatgtggccgat
gccatcgatgccgatatggcccgacgtctgctgattccgttcgttgaggattcgggtggc
gtctatgctccgaccttgcgcagcatcgcgggcaaatatgtgatcgcctccacggtggcc
cgcatcgacatggataaggcgattgcggcggggtgtgcacggtcggaactggatgatgcg
atacggtccgcaggtaatttcatcatcgaagccgacgcgattgagggaccttggcgtggc
ccgttctggatttccggtgcggagggcattgatccggatgtgttcgaggaccgggacggc
aatgtgtattggacgcagaccagacccgccattcatccgcagtgggagggacagaccgaa
atctggacccaacgcattgatgcggattcctggtcattactcgaagatggggctccggct
ggccgagggaagacgattatctggcgtggatacggtatggaggcggtatgggccgaaggg
ccgcatttgtaccgtatcggtgattacgtatatctgctgacggctgagggcggtacgggt
ttcgaacacagtgagatggccatgcggatgtatgctccgaatggtttggctgaagcgttc
gccaagtatgaacgtatggccgtcgaagtgggggagcggataccgtcggtgcgcgaaggc
gaacggtgctacttgggcaatgcgattcgcgcgtttcatgtcgataggaagaatccgata
ctcacgcatcgccattggggcatgtccgaaccggtgcaatgcgtcggtcatgcggatttg
ctgcagcatccgcaattcggttggtggatgatggccgggttctggccgaattcgatgcgc
ggttcctga
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