Bifidobacterium dentium Bd1: BDP_0900
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Entry
BDP_0900 CDS
T01143
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
bde
Bifidobacterium dentium Bd1
Pathway
bde03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
BDP_0900 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
bde03011
]
BDP_0900 (rpsA)
Ribosome [BR:
bde03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
BDP_0900 (rpsA)
Bacteria
BDP_0900 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
RNase_II_C_S1
OB_RRP5_4th
Caudal_act
Motif
Other DBs
NCBI-ProteinID:
ADB09554
UniProt:
D2Q9R8
LinkDB
All DBs
Position
1026273..1027745
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AA seq
490 aa
AA seq
DB search
MAENNNEVAKVAINDIGTEEDFIKAVDSTIKNFDDGDLVEGTVVKVDHDEVLLDIGYKTE
GVIPSRELSIKKDVDPDEVVEVGDTIEALVVTKEDKEGRLILSKKRAQYERAWGDIEKIK
EADGVVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQKIKAKILELDKNR
NNVVLSRRQYLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHVSEL
SWKHIDHPSEVVKVGDKVTVEVLDVDLDRERISLSLKATQEDPWQRFARTHVPGQIVKGK
VTKIVQFGVFISVEDGIEGLVHISELANRHVENPETVVKPGEEVFVKVIDVDLDRRRISL
SLKQANDSVDPASEDFDPALYGMPAEYDEQGNYKYPEGFDPATNEWIAGYEKQREEWEAQ
YAAAHDLWEQHKEFVAKELENAAASAAEDGQAPKEEKVEEVSNYSSENTSAGTLADSDQL
AALRDQLLGK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaacaataacgaagtcgccaaggtcgccatcaacgacatcggcaccgaagag
gacttcatcaaggcagtcgattccaccatcaagaacttcgatgatggtgatctggtcgaa
ggtaccgtcgtcaaggtcgatcacgacgaggtgctgctcgacatcggctacaagaccgag
ggcgtcattccctcccgtgagctttccatcaagaaggacgttgatcctgacgaagtcgtc
gaggtcggcgacaccatcgaggctcttgtcgtcaccaaggaagacaaggaaggccgtctg
atcctgtccaagaagcgtgcacagtacgagcgcgcctggggcgatatcgagaagatcaag
gaagccgatggcgttgtcgaaggtaccgtcatcgaagccgtcaagggcggccttatcgtc
gacatcggcctgcgtggcttcctgccggcatcgctggtcgaaatgcgtcgcgtgcgcgac
ctgtccccgtacattggccagaagatcaaggccaagattctcgagctcgacaagaaccgc
aacaacgtggtcctttcccgtcgtcagtacctcgaagagacccagtccgaagtgcgtgag
accttcctgtctcagctcaagaagggccagattcgtgaaggcgtcgtgtcctccatcgtc
aacttcggcgcattcgtcgatctgggcggcgttgacggcctgattcacgtttccgagctg
tcctggaagcacatcgaccacccgtccgaggtcgtcaaggtcggcgataaggtcaccgtc
gaggtgctcgacgtcgatctcgaccgtgagcgcatctccctgtccctcaaggccacccag
gaagatccgtggcagcgcttcgctcgcacccacgttcctggccagatcgtcaagggcaag
gtcaccaagatcgttcagttcggtgtcttcatctccgtcgaagacggcatcgaaggcctc
gtgcacatctccgagctggccaaccgccacgtggagaacccggagaccgtcgtcaagccg
ggcgaagaggtcttcgtcaaggtgatcgacgtcgatcttgatcgtcgccgcatctccctg
tccctcaagcaggccaacgactccgtcgatccggcttccgaggacttcgatccggctctg
tacggcatgccggcagagtacgacgagcagggcaactacaagtatccggaaggcttcgac
ccggcaaccaacgagtggatcgctggttacgagaagcagcgtgaggagtgggaggcccag
tacgcggcagcccacgacctgtgggagcagcacaaggagttcgtcgccaaggaactcgag
aacgcagccgcttccgccgccgaggacggccaggctccgaaggaagagaaggtcgaagag
gtgtccaactactcctccgagaacacttccgccggtacccttgccgactccgaccagctc
gccgctctgcgcgaccagctgctcggcaagtga
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