Bifidobacterium dentium Bd1: BDP_0937
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Entry
BDP_0937 CDS
T01143
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bde
Bifidobacterium dentium Bd1
Pathway
bde03030
DNA replication
bde03430
Mismatch repair
bde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BDP_0937 (dnaQ)
03430 Mismatch repair
BDP_0937 (dnaQ)
03440 Homologous recombination
BDP_0937 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bde03032
]
BDP_0937 (dnaQ)
03400 DNA repair and recombination proteins [BR:
bde03400
]
BDP_0937 (dnaQ)
Enzymes [BR:
bde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BDP_0937 (dnaQ)
DNA replication proteins [BR:
bde03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BDP_0937 (dnaQ)
DNA repair and recombination proteins [BR:
bde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BDP_0937 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
AcaB
Motif
Other DBs
NCBI-ProteinID:
ADB09585
UniProt:
D2Q9U9
LinkDB
All DBs
Position
1054281..1054919
Genome browser
AA seq
212 aa
AA seq
DB search
MYWDRYINRNNPRRIEPLDKPLDTYVMLDTETTGLHPEEGATIIEIGALLVTPGNENARP
RFEQLVDPQRPLPEFISRLTGISDGMLRDKPTADAAMLRFHQWLDDVWPTGKPLTIIAHN
AEFDIGFLDAAERAHDPDANEFDCRWLCTKEMSWELNPRKRHHRVSDLIVDYRIGDVEEH
RALSDAIQEQMIYRALCREASMRGRWGRERVS
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtattgggatcgctacatcaaccgaaataatccacgtcgcatcgaaccactcgacaag
ccgctcgacacgtacgtgatgcttgacacggaaaccacgggactccatcccgaggaagga
gccacgatcatcgagatcggcgcattgctcgtgacgccgggcaacgagaacgcaaggccg
aggttcgagcagctggtcgacccgcaacgtccattgccggaattcatcagccgactcacc
ggcatcagcgacggcatgcttcgggacaagcccaccgccgatgccgcgatgctgcgcttc
caccaatggctcgacgacgtctggccgacagggaaacccttgaccatcatcgcccacaac
gccgaattcgacatcggcttccttgacgcggccgaacgcgcccatgatccggatgcgaac
gagttcgactgccgttggctgtgcacgaaggagatgagctgggagctcaacccgcggaaa
cgccatcaccgcgtcagcgacctgatcgtcgactaccgcatcggggacgtcgaggaacat
cgcgcgctgtccgacgcgatccaggagcagatgatctaccgggccctgtgccgggaagcg
agcatgcgagggaggtggggacgggaacgagtctcatga
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