KEGG   Bifidobacterium dentium Bd1: BDP_1166
Entry
BDP_1166          CDS       T01143                                 
Name
(GenBank) RNA pseudouridylate synthase
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
bde  Bifidobacterium dentium Bd1
Brite
KEGG Orthology (KO) [BR:bde00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bde03009]
    BDP_1166
Enzymes [BR:bde01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     BDP_1166
Ribosome biogenesis [BR:bde03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    BDP_1166
SSDB
Motif
Pfam: PseudoU_synth_2 S4 SYY_C-terminal
Other DBs
NCBI-ProteinID: ADB09795
UniProt: D2QAF9
LinkDB
Position
complement(1313248..1314021)
AA seq 257 aa
MPNAYSRAAKAHDNNNEGIRLQKLLAQAGFGSRRKCEEIITDGRVEIDGELITELGTRVD
PKHQEVRVDGSRVRVNPNHVTLALNKPKRVLSAMDDPKGRYTLRDIVGDKYERIFHMGRL
DYDSEGLILMTNDGELSQHIMHPKYEVEKTYIATLDGRISGTVCRRLVTTGVQLDDGWIK
LDRCAILDSSRDSTLVKVVLHSGKNRIVRRIFGSIGFPVRRLVRTQIGPIKLGDLKSGTY
RVLSQVEVRSLSKAVGL
NT seq 774 nt   +upstreamnt  +downstreamnt
atgccaaacgcatattcccgcgccgccaaggcgcacgataacaacaatgaaggtatccgc
ctgcagaagctgctcgcacaggcaggtttcggatcccgtcgcaaatgcgaggaaatcatc
accgacggacgcgtcgagatcgacggtgaactcatcaccgagctcggcacccgagtcgat
ccgaagcaccaagaggttcgagtggatggttcccgcgttcgcgtgaatcccaatcatgtc
acactcgccctgaacaagccgaagcgtgtgctgagcgccatggatgacccgaagggacgt
tacaccctgcgcgatatcgtcggcgacaagtacgagcgcatcttccacatggggcgtctg
gactacgactccgagggtctgattctcatgacgaacgacggcgaactcagccagcatatc
atgcaccccaagtatgaggtcgagaagacctacatcgccaccctcgacggtcgtatcagc
ggcacggtctgccgccgtctggtcaccaccggcgtgcagctcgacgacgggtggatcaaa
ctcgatcgttgcgccattctcgattccagccgtgacagcacattggtgaaagtggtgctg
cattccggcaagaaccgcatcgtacgtcgtatcttcggctcaatcggcttcccggtcagg
cgtttggtccgtacgcagatcggtccgatcaagcttggcgatttgaagtccggtacgtac
cgggtgctttcgcaggtcgaggtgcgttccctgtcgaaggcggtgggactgtga

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