Bifidobacterium dentium Bd1: BDP_1216
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Entry
BDP_1216 CDS
T01143
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bde
Bifidobacterium dentium Bd1
Pathway
bde03030
DNA replication
bde03430
Mismatch repair
bde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BDP_1216
03430 Mismatch repair
BDP_1216
03440 Homologous recombination
BDP_1216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bde03032
]
BDP_1216
03400 DNA repair and recombination proteins [BR:
bde03400
]
BDP_1216
Enzymes [BR:
bde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BDP_1216
DNA replication proteins [BR:
bde03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BDP_1216
DNA repair and recombination proteins [BR:
bde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BDP_1216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
PDZ_5
DNA_pol3_delta
Major_capside
Mn_catalase
Motif
Other DBs
NCBI-ProteinID:
ADB09843
UniProt:
D2QAK7
LinkDB
All DBs
Position
complement(1361315..1362226)
Genome browser
AA seq
303 aa
AA seq
DB search
MRDQCVAAQRKYPDAELIELDAMGADHYAFDEAVSPSLLSDRAIVKIVNLQGTDEKLGDA
MVEYCRQACKDPTDCSIVICQHEGGVKGKRLVDQLTKAGADKQVVPDLKKADAKLNFVMQ
CFDRRNRRVDPMAAQQLVAVLGEKTGELAAMVAQLCFDFDDDPMGLNRVNQYLDSNPQVT
GFVVADQAMAGRSADAIIAMRSAVEQGIDPIALIGALAMKLRTLAKASAVRAGTISQAEA
KTNPWALKNATRQLPGWTSAGLGRCIQMLAWADEQSKTSGGDPVYALERSIELISQKGRI
NRS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgatcagtgtgttgccgcgcaacgcaagtatcctgatgcggaactgatcgaattg
gatgcaatgggcgcggatcattatgctttcgacgaagcggtgagtccttcgttgctcagc
gatcgggcgatcgtgaaaatcgtcaacctgcaaggcaccgacgaaaagcttggtgatgcc
atggtcgaatattgcaggcaggcatgcaaggatcccacggactgcagcattgtcatctgc
cagcatgaaggcggagtcaaaggcaaacgactggtggatcagctcacgaaggccggagcc
gacaaacaagtcgtgcccgatctgaaaaaggccgacgccaagctcaacttcgtcatgcaa
tgcttcgatcgtagaaaccgtcgtgtggacccgatggcagcacagcagctcgtggccgta
ctcggcgagaaaaccggtgagcttgctgcgatggtcgcccagctgtgttttgatttcgac
gacgatccaatgggattgaatcgtgtgaaccagtatcttgattccaacccgcaggtcact
ggttttgtcgtagccgatcaggccatggccggtcgttccgccgatgccatcatcgccatg
cgatcagcggtggagcagggcatcgatccgattgcgctgatcggagcccttgccatgaag
ctgcgtacgctcgccaaagcgtcggctgtgcgtgccggtaccatttctcaagcagaggcg
aaaacgaacccgtgggcactcaagaatgccacacggcaacttcccggatggacttcggca
ggtctgggccgatgcatccagatgcttgcatgggcggacgagcaaagcaaaaccagtgga
ggagacccggtctatgcgctggaacgctccatcgaactcattagtcaaaaaggacggatc
aacaggtcatga
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