Bifidobacterium dentium Bd1: BDP_1342
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Entry
BDP_1342 CDS
T01143
Name
(GenBank) Helicase
Organism
bde
Bifidobacterium dentium Bd1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADB09955
UniProt:
D2QAW9
LinkDB
All DBs
Position
complement(1508124..1511948)
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AA seq
1274 aa
AA seq
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MPGELTWLSDELHSECNTAVLQRARGITNQWRAKMRDLYCLNDPEADRITLSASVRGTTS
PSSNYTVQATVDMGDQLLLARYCSCPAFAGADSAHDRGYRDSFGYRSFSDDDEIYDYEDA
DYDDFGREPAFGHVDDGNDDADAYQSPHGFGRRSRRSADGRSAGTGSRYTGMCKHLAAMI
MLFVQTPERFHGYQPGNATPRYIADYMRRIDAERHTSNKDSQLDLLKRIANAKQRLGEEQ
GWLAPDHHGKAGGSHNDGPAIVLPGSVHLEPTITLTEGTTWSLSLRIGHDNTSYVLRNIS
RFVSNMRTGAYESYGRKLAFTHTPDMLDRFSQSVLTLLNRVLATRAISQMQNRYSYGDAV
TVQRDLLLTDWEVCDLLDLHDALPLPLPNGEASENTHAMETDDIAGPAQHKPTSIMVASG
LSHAGELNIIEGNPAFGFNVSYERHGEDRGIRIIADKVIMGTVTGQHSRYMICAQTNGYA
DTALYRCSAAMEPAFGQLSSLCVGDPDGVFIAEEDWPMFARTILPALADAGIGLHVPQEV
AYAIGAECRIEYYLDRDLYGMTCEVVARYGDFVFQLVPAAKELRGVVNPDSTSKASLVKR
DQECETLAVQVARQLFPTWSATDPARVREEDEDAILLLITEGVEILKSMGQVFSTAAFDG
LMSPSKPSVKVGLSVESNLVEISPIADEVPMNEVGALLDSYRRRRRYHRLHDGTFVDLRD
ADLGELDRIASDLDLTGTQLDGGTIAIPGYQAFLLDAQVPDERKNASFTSYVNDVKIIDP
SRYEVPQALRNVLRPYQAEGFRWLSTLWDKGFGGILADEMGLGKSVQLLALVEARKGNGP
TLIVCPASLVYNWAAECEKFTADLTVEVVAGTKTERRNVLRRLRAMAKSESSSSSVSEAS
SESEDGPDILITSYDLLRRDIDEYAGCRFACMVLDEAQYIKNHATKVAKVVKQVNAAHRF
ALTGTPIENRLSELWSIFDFLMPGLLGTYTRFRERYEQPILAPGPEQSVMADKLRALVGL
FIKRRLKKDVLTDLPDKFENVVTVKLAGEQRKLYAAHEQRLRAALTKTRDADFNTSRIRI
LAEFTLLRELCCDPRLVYADAKNGSAKLEAIDDLVANCMDEGKKVLIFSQFTSFLDLIGV
RLAEHGVAFHAITGETPKRKRVELVDEFNGDDAPVFLISLKAGNTGLNLVGASVVIHADP
WWNEAAQNQATDRAHRIGQTQDVNVYRIVAKDTIEERMLKLQRDKSRLARQFTDGGASGG
VGSLTKDDLLDLLS
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
gtgccaggcgaactcacgtggctttccgacgaactgcatagcgaatgcaacacggcggtg
cttcagcgtgcccgcggcatcaccaaccaatggcgcgccaagatgcgggatctgtactgt
ctgaacgatcctgaagcggaccgtatcacactgagcgcctccgtacgcggcaccacttcg
ccttccagcaactacacggtgcaagccaccgtcgatatgggcgaccagctgctgctcgca
cgctactgcagctgccctgccttcgcaggcgccgattccgctcacgacagaggataccgc
gacagcttcggctatcgtagtttctccgatgacgacgaaatctacgattacgaggatgcc
gattacgacgatttcggcagggaacccgcattcggtcacgtggacgacggcaacgatgat
gccgacgcctaccaaagcccacacggcttcggccggagatcccgtcgaagcgccgacgga
cgttccgctggaaccggatcccgctataccggcatgtgcaagcacctcgccgcaatgatc
atgctgttcgtgcaaaccccggaacgtttccacggctaccagccgggcaatgccacccca
cgatacatcgccgactacatgaggcgaatcgatgccgaacgacatacgtcgaacaaggac
tcccagctcgacctgcttaaacgcatcgccaatgcgaaacagcgattgggcgaagaacaa
ggatggctggcgcccgaccaccatggcaaagcgggcggttcccacaacgacggcccggcc
atcgtgctgccgggcagcgtgcatcttgaaccgacgatcacgctcaccgaaggaacgacc
tggtcgctgagcctgcgcatcggccacgacaacacctcgtacgttctgagaaacatctcg
agattcgtatccaacatgcgaacgggagcctatgaatcatatgggcgtaagctggccttc
acccatacgccggatatgctcgaccggttctcgcaaagcgtcctgacattgctcaaccga
gtactcgctacacgtgccatctcacagatgcaaaaccgatactcctacggtgatgccgta
accgtgcaaagagacctgctcctcaccgattgggaggtctgtgacctgctcgacctgcac
gacgcattgccattacccctcccaaacggagaggcatcggagaacacgcatgccatggag
actgacgacatcgcagggccggcgcaacacaagcccacgtccatcatggtcgcctccgga
ctgagccatgccggcgaactcaacatcatcgaaggaaatccggcgttcggcttcaacgta
tcgtacgaacgtcacggtgaagatcgcggcatacgcatcatcgccgacaaggtgatcatg
ggcacggtaacgggccaacacagccgttatatgatctgcgcccagaccaatggctacgca
gataccgcactctaccgttgctccgccgcaatggaaccggcattcggccagctctcctca
ctatgcgtaggcgatccggacggcgtattcatcgccgaagaggactggcccatgttcgca
cgcaccatacttcccgcgctcgccgacgccggcatcggcttgcatgtgccgcaggaagtc
gcctatgcgatcggtgcggaatgccggattgaatattatctggaccgtgacctgtacgga
atgacctgtgaagtcgtggcacgatatggggacttcgtatttcagctggtccccgcagcc
aaggagttgcgtggcgtcgtcaaccccgactccacatccaaggcttcgctggtcaagcgc
gatcaggaatgtgagacgctcgctgtgcaagtggcgcgtcagctgtttccgacatggagc
gccaccgatccggcgcgtgtcagggaagaggatgaagacgccattctgctgctgatcacc
gaaggtgtggagattctcaaatcgatgggtcaggtgttctccactgccgccttcgacggc
ttgatgtctccgtcgaagccgagcgtcaaggtcgggttgtcggtcgaatcgaaccttgtc
gagatttcgccgatcgccgacgaagtaccgatgaacgaggtcggtgcactgcttgacagt
tatcggcgcagacgtcgctaccatcggctgcacgacggcaccttcgtggatctgcgggat
gccgatttgggtgaactcgatcgtattgcctcggatcttgacctgaccggaacgcaactt
gacggcggaaccatcgccattccgggctatcaggcgtttctactggacgcacaggtgccg
gatgaacgcaaaaacgcatccttcacctcgtatgtcaacgatgtgaagatcatcgatccg
agtcgctatgaggtaccgcaagcgttgcgcaacgtgctgcggccatatcaggcggaggga
ttccgctggctttccacattatgggacaagggattcggtggcattctcgccgatgagatg
ggcctgggcaaatccgtgcaactgcttgcccttgtcgaggcacgtaaggggaatggcccg
acgctcatcgtctgcccggcatcgctcgtctacaactgggccgcggaatgcgagaaattc
actgccgatcttaccgtggaggtcgtggccggcaccaagacggaacgccgcaacgtgctg
cggcggctacgggcaatggcgaaatcggagtcctcgtcatcctccgtttccgaggcatcc
tccgaaagcgaggacggtccggacatactcatcacatcctacgatctgttgcgtcgcgat
atcgacgaatacgccggctgcaggttcgcatgcatggtgctcgacgaggcgcaatacatc
aagaaccacgccaccaaggtggcgaaagtggtcaagcaggtgaacgccgcgcatcgcttc
gcattgaccggcacgccaatcgagaaccgtctgagcgaactgtggagcatcttcgatttt
cttatgccggggctgctgggcacttatacgcgattccgcgaacggtacgagcagccgatt
ctggcgcccggtccggaacagtccgtcatggctgacaagttgcgggcgttggtcggcctg
ttcatcaaacgacggttgaaaaaggacgtgcttaccgatctgcccgacaagttcgagaac
gtcgtgaccgtgaagctggcgggggagcaacgcaaactgtatgcggcgcacgaacagcgg
ctacgcgccgcactcaccaaaacacgggatgccgatttcaacacgagcaggattcgcatt
cttgcggaattcacgttgctgcgcgagctttgctgcgatcctcggctggtgtatgcggac
gcgaaaaacggctcggccaagcttgaagccatcgacgatttggtggccaactgcatggat
gagggcaagaaggtgctcatcttctcgcagttcacgtcgttccttgacctgattggcgtg
cgactcgccgaacacggcgttgcgttccatgcgattaccggtgagacgccgaagaggaag
cgcgtggagctggtggatgagttcaatggcgatgatgcgcccgtgttcctgatctcgctc
aaagccggcaataccggcctgaacttggtcggtgcatccgtggtgattcatgccgatcct
tggtggaatgaggctgcacagaaccaagccactgaccgcgcacaccgcatcgggcagaca
caggacgtgaacgtgtaccggattgtggcgaaagacaccattgaggagcgcatgctgaag
ttacagcgggacaagagccggctggcacggcaattcaccgacggtggcgcttcgggcggc
gtcggctcgctcaccaaggacgatctgcttgatctgctgagctga
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