Bifidobacterium dentium Bd1: BDP_1404
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Entry
BDP_1404 CDS
T01143
Symbol
gyrA2
Name
(GenBank) gyrA2 DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bde
Bifidobacterium dentium Bd1
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bde03032
]
BDP_1404 (gyrA2)
03400 DNA repair and recombination proteins [BR:
bde03400
]
BDP_1404 (gyrA2)
Enzymes [BR:
bde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BDP_1404 (gyrA2)
DNA replication proteins [BR:
bde03032
]
Prokaryotic type
DNA Topoisomerases
BDP_1404 (gyrA2)
DNA repair and recombination proteins [BR:
bde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BDP_1404 (gyrA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ADB10012
UniProt:
D2QB26
LinkDB
All DBs
Position
1571154..1573847
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AA seq
897 aa
AA seq
DB search
MVSHRKPAQPAFDPRTVKEHIVETPLNEEMSKSFLEYAYSVIYARALPDARDGLKPVQRR
IIYQMGQMNLSPDRPYMKSARVVGEVMGKLHPHGDSAIYEAMVRLAQPFAMRLPLVDGHG
NFGSLDDGPAASRYTEARMAQAALGMNADIAEDTVDFTPNYDNKLQEPTVLPSAIPNLLV
NGGSGIAVGMATNMATHNLGEVVAAAKHLMRHPDATLEDLMRYVPGPDWPSGGVIVGRSG
IREAYESGRGALTTRSVTHIENVTARKKAIVVTELPFMVGPERVLERISEGVKNRKLEGI
SGAIDLTDRHNGTRLVIEIKTGFDPNAVLAQLFRHTPLQDNFTINNVALVNGRPHTMGLK
EMLKVWVDHRRVVIRRRSEFRRRKALERLHLVEGLLLAMVDIDEVIQVIRSSDDAEAAKT
RLIAVFDLDDIQAQYILDLRLRRLTKMSRIELEAERDDLKQRIEELERILASDEALDGVV
IDEMDEAVAAYGTPRRTVLLDEDADGGLVPVTAHGDDGVSATALAAARTAATVSSAAADV
AAAAKAAKKAGEDNATATALQIDDEPCAVMLSATGLIARTHEDAVERWENRSGSDARTKD
DQIVSIFRTTTRSSYGLITSAGRLVLAHVVELPAVAPDGPLNVSGGVKAEELLGMTENTD
PIRGERVIAAIAMPSVDDAGKDGDGAEPAPLALGTRNGVVKRWNRESPTTMDSWSVIDLK
DGDEVLAAAEARDGDRLVFVSTDSSLLTFEAKNVRPQGRTAGGMAGIRLATGCSVAAFAV
VPTEKVAWTYDEGENGLFSASGAVVLTVAGDSEALPGTENGAAKVTPLEMYPTKGRGTGG
VRSQRFLKGQNTLIFAFVGAYPIHASTEGGSGVELPKPDMRRDGSGTDMAAPIAVAG
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggtatcgcaccgcaaaccggcacaacccgctttcgacccgcgtacggtcaaggagcac
atcgtcgagacgcctctgaacgaggaaatgagcaagtcgttcctcgagtatgcatactca
gtgatctatgcgcgtgcactgcctgacgccagggacggtctcaagcccgtgcaacgccgc
atcatctaccagatgggccagatgaatctctctcccgaccgcccatatatgaaatcggca
cgtgtggtcggcgaggtgatgggcaagctccatccgcatggtgattccgcaatctacgag
gccatggtgcgtctcgcccaaccgttcgcgatgcgtctgcccttggtggatggccacggc
aatttcggttcccttgatgacgggccggcggcatcccgctacaccgaagcgcgtatggca
caggccgcactcggcatgaacgcggacatcgccgaggacaccgtcgatttcacccccaac
tatgacaacaagcttcaagagccgaccgttctgccctcggccattccgaatctgctggtc
aatggcggttccggcatcgcggtcggcatggccacgaacatggccacgcataatctcggc
gaagtcgtggcggcggccaagcatctgatgcgtcaccccgatgccacgttggaggatctg
atgaggtatgtgccaggtccggattggccaagcggcggcgtaatcgtggggcggagcggc
attcgcgaggcatatgagagcggccgtggcgcactgaccacccgttcggtgacgcatatc
gaaaacgtgacggcacgcaagaaggccattgtcgtgacggaactgccgttcatggtggga
ccggaacgtgtgttggagcgtatttccgaaggtgtgaagaatcgcaagctggagggcatt
tccggtgcgatcgacctgacggatcgacataacggcacacggttggtcatcgagatcaag
accggtttcgatccaaatgccgtgttggcacagctgttcaggcacacgcccctgcaagac
aatttcaccatcaacaacgtagctctggtcaacggtcgtccgcacaccatgggattgaag
gaaatgctcaaggtgtgggtggatcatcgtcgtgtggtgattcgccgccgtagcgaattc
cgcagacggaaggcgttggagcgcctgcatctggtcgaaggcctgctgttggccatggtc
gatatcgacgaggtcattcaggtgattcggtcctccgatgacgccgaggccgcaaaaacc
agactgattgccgtattcgatttggacgacattcaggcgcagtacattctcgacttgcgt
ctgcgccgcctgacgaagatgagccgtatcgaacttgaggccgaacgcgacgatctgaag
caacgcatcgaagagctggagcgcatcctcgcctccgacgaagccttggacggtgtggtg
atcgatgagatggacgaggccgtcgccgcatatggcacaccacgacgtaccgtgctgttg
gacgaggatgccgacggcggtctggtaccggtgaccgcgcatggcgatgatggtgtttcc
gccaccgcgctggctgccgcccgcaccgccgcgaccgtgtcttcggcagccgccgacgtg
gccgccgccgcgaaagccgcgaaaaaagccggcgaggataatgcgaccgcgaccgccttg
cagatcgatgacgaaccctgtgcagtgatgctgagcgccaccggtctgatcgctcgcacc
catgaggatgccgtggaacgttgggaaaaccgttccggctcggatgcgcgaaccaaggat
gaccagatcgtttcgatcttccgcacgaccacgcgctcctcatacgggctgatcacttcc
gcaggtcgcctggtgttggcgcatgtggtcgagttgccggccgtcgccccggacggcccg
ttgaacgtttccggcggcgtgaaagccgaggaattgctaggcatgacggaaaacaccgat
ccgattcgcggcgaacgtgtaatcgccgccatcgcaatgccctccgtggacgatgccggc
aaggatggcgatggcgccgaacctgctccgctggcgctgggtacgcgcaacggtgtggtc
aaacgctggaatcgcgagtcaccaaccaccatggattcctggagcgtcatcgacctgaag
gacggtgatgaggttctggccgcggccgaagcgcgggatggggatcgtctggtgttcgta
tccacggattcctcgctgctgacattcgaggcgaagaacgtgcgaccacagggccgtacc
gccggtggcatggcgggcattcgtttggccaccggctgctcggtcgccgcattcgccgtg
gttccgaccgaaaaggtcgcttggacgtatgacgaaggcgagaatggtctgttctccgct
tccggcgccgtggtgctgaccgtcgctggtgattccgaggcgttgccgggtacggagaac
ggcgcggcgaaggtcacgccgttggagatgtacccgaccaagggccgaggcactggtggc
gtacgttcgcaacggttcctgaaaggtcagaatacgctgatcttcgctttcgtgggtgca
tatccgattcatgcctccacagagggtggctccggtgtggagttgcccaaacccgacatg
cgtcgcgacggctccggtacggatatggccgcccccatcgccgttgccggttga
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