Bifidobacterium dentium Bd1: BDP_1410
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Entry
BDP_1410 CDS
T01143
Symbol
gyrB2
Name
(GenBank) gyrB2 DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bde
Bifidobacterium dentium Bd1
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bde03032
]
BDP_1410 (gyrB2)
03400 DNA repair and recombination proteins [BR:
bde03400
]
BDP_1410 (gyrB2)
Enzymes [BR:
bde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BDP_1410 (gyrB2)
DNA replication proteins [BR:
bde03032
]
Prokaryotic type
DNA Topoisomerases
BDP_1410 (gyrB2)
DNA repair and recombination proteins [BR:
bde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BDP_1410 (gyrB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ADB10018
UniProt:
D2QB32
LinkDB
All DBs
Position
complement(1582324..1584660)
Genome browser
AA seq
778 aa
AA seq
DB search
MAKDNYGAGSLTVLEGLDAVRKRPGMYIGTTDSQGLMHCLWEIIDNSVDEALAGACNHIV
VTLHSDGSVEVADNGRGIPVDVEPKTKLTGVEVVLTKLHAGAKFGNSSYGASGGLHGVGS
SVVNALSSRLDVEVDRDGKTHHMSFHQGHPGVYADADPEHPSPDSPFKRTRKNRPTELEI
IGKVSPKTTGTRIRYWADPEIFNDTAEFSYEQLIDRVRQTSFLVPGLKITVIDENIPETG
DESIDEMREIDVPADGTSDAVVDATDEVDDTDNIGSAIEGFDEVAVDNADEVESPENATG
DEQPEQPSQPARQRYGHARVEEFCHNGGVKDFVDFLSKGEAVSDIWRITGDDTYVEETQA
VGEGGELHAQKVTRDCAVDIAMRWTDGYDTTMRSFVNVVETPGGGMHVDGFLQGITKQIR
KAVEDNARKLKVNLKDSNMKVERDDIMAGLVAVVTVRIAEPQFQGQTKDVLGTAQVKPIV
TRMTDRQFGEMITGSKRGYKEQSGRVLEKIVGEMHARIQARKTKEVTRRKNALESASMPP
KLSDCQPGNDDVAELFIVEGDSALGTAKAARNSGFQALLPIRGKILNVQKASLAQMLSNK
ECAAIIQVVGAGSGASFDIEQARYNKIIMMTDADVDGAHIRILLLTLFYRYMRPLIEHGH
VYAAVPPLHRIALTGAHKGEYIYTYSDDELAGKLSELERKHIAYNDDIQRYKGLGEMDAD
QLADTTMDPRTRMLRRIRMEDAEQANEIFSLLMGDDVPPRKAFIVENADDFDRSKIDT
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggataattacggcgcaggcagcctaaccgtgctggaaggtctggacgcggtg
cgcaagcgtccgggcatgtacatcggcacgaccgacagccagggtctgatgcactgtctg
tgggagatcatcgacaactccgtcgatgaggcccttgccggtgcctgcaaccatattgtc
gtgacgttgcattccgatggttccgtcgaagtcgccgacaacggccgcggcattcccgtc
gacgtggaaccgaaaaccaagcttaccggcgtggaagtggtgctcaccaagcttcacgcc
ggcgcgaagttcggcaattcctcctatggcgcttccggcggtttgcatggcgtgggctct
tcggtggtcaacgctttgagctcccgacttgacgtcgaagtggatcgtgacggcaaaacg
catcacatgtcgttccaccagggacatcccggtgtgtacgccgatgcggatccggagcat
ccgtctcccgattcgccgttcaaacgcacgcgcaagaaccgtccgaccgagttggagatc
atcggcaaggtcagtccgaagaccaccggtacccgtatccgatattgggccgatccggaa
atcttcaatgacaccgccgaattcagttatgagcagcttatcgaccgtgtacgccagacc
agttttctggtaccgggactgaaaatcaccgtcattgacgagaatattcccgaaaccggt
gacgaatccatcgacgaaatgcgggagatcgacgtaccggcggacggaacgtcggatgcc
gtggtggacgctacggacgaggtggacgatacggataatatcggatcggcgatcgaaggc
ttcgatgaagtagcggtagacaatgccgacgaagttgagagcccagagaacgctaccggt
gatgagcaaccggagcaaccgtcgcaaccggcgcgacagcgctacggtcacgcgcgtgtc
gaggaattctgccacaacggtggggtgaaggacttcgtcgacttcctctccaaaggcgag
gcggtctccgacatttggcgcatcaccggtgacgacacttatgtcgaggagacccaggcc
gtaggcgaaggcggcgaactgcacgcgcagaaggtcacccgcgactgtgccgtcgatatc
gccatgcgttggaccgacggttacgacaccaccatgcgcagcttcgtgaacgtggtcgaa
actcccggcggcggtatgcatgtggatggtttcctgcaaggcatcaccaaacagatccgc
aaggccgtggaggacaacgcgcgcaaactcaaggtgaatctcaaggattccaacatgaag
gtcgagcgcgacgacatcatggccggcctcgtggccgtggtgaccgtacgtatcgccgaa
ccccagttccaggggcagaccaaggatgtgctgggtaccgcgcaggtcaaaccgatcgtc
acccgcatgaccgacaggcagttcggcgagatgatcaccggttccaagcgtggctacaag
gagcaatccggccgcgtacttgaaaagatcgtcggtgagatgcacgcccgcattcaggcg
cgtaagaccaaagaggtcacccgccgtaagaatgcgctcgaatccgcttccatgccgccg
aaactgtctgattgccaaccgggcaacgatgatgtggcggaactgttcatcgtcgagggc
gattccgcattgggcaccgccaaggccgcacgaaactccggtttccaggcgttgttgccg
attcgaggcaagattctcaacgtgcagaaggcctcactggcgcaaatgctgtcgaacaag
gaatgcgcagccatcattcaggtggtcggcgcgggttccggggccagtttcgatatcgag
caggcacgatacaacaaaatcatcatgatgaccgatgccgatgtcgatggcgcgcatatc
cgcattctgctgctcacgctgttctaccgctacatgcgtccactcatcgagcacggtcac
gtgtatgccgccgttccgccattgcatcgcatcgccctgaccggcgcgcataagggcgag
tacatctatacctattccgatgacgagctggccggcaaactttccgagctcgagcgcaaa
catatcgcctataacgatgacattcagcgctacaagggcttgggtgagatggatgccgac
cagctcgccgacaccaccatggatccgcgtacgcgcatgctgcgccgtatccgcatggag
gacgccgaacaggccaacgagatcttcagtctgctcatgggcgatgacgtgccgccgcgc
aaggcgttcatcgtcgagaacgccgatgatttcgaccgttccaagatcgatacctga
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