Bifidobacterium dentium Bd1: BDP_1544
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Entry
BDP_1544 CDS
T01143
Symbol
murD
Name
(GenBank) murD UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
bde
Bifidobacterium dentium Bd1
Pathway
bde00470
D-Amino acid metabolism
bde00550
Peptidoglycan biosynthesis
bde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BDP_1544 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BDP_1544 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bde01011
]
BDP_1544 (murD)
Enzymes [BR:
bde01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
BDP_1544 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
bde01011
]
Precursor biosynthesis
Amino acid ligase
BDP_1544 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
ADB10138
UniProt:
D2Q5C3
LinkDB
All DBs
Position
complement(1725512..1726954)
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AA seq
480 aa
AA seq
DB search
MVDMDVNGKTVIVAGLGISGRSMMQVLKPRAGKVIGVDEKQPDADLHSFDQIDWDDVDLV
MTSPVFNPRTPFILEAQRRGIPVMSEVELAWQLRVNADSTGEPARWIGITGTNGKTSTTE
MTSEMLTACGLTAPAVGNIGKAVSHAAVDPANDVLCVELSSFQLHFTDSLALDGAAITNI
ADDHLDWHGGIDNYAADKAKVFHRASKALVYNADDIRVTELAERAETAEGCRRIGFTLHK
PEAGQIGIVDGWIVDMSGVAGGEPDQPVKVAKIADFTHLTEPDGTVYPHLLADALTALAL
ALGLGVDKGTAIAALQRFTPGGHRIQTVATAHESDGGIIRFVDDSKATNAHAAKASLNSF
ADKSVVWIAGGLAKGSRFERLVADQAHTIKAAVIIGEDQQPMLDAFKASAPQIPLTVIDP
ADKSTVMARAVNAAGAYAESGDVVLMAPACASMDQFVSYADRGNQFADEARRWVSEHGEA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtggttgacatggatgtgaacggtaagaccgtgatcgtggcgggtctgggtatttcgggc
cgaagcatgatgcaggtactgaagccaagggctggcaaggtcatcggcgtggatgaaaag
cagcccgatgccgacctgcactccttcgaccagatcgattgggacgacgtggatctggtg
atgacctctccggtgttcaatccacgtacgccgttcatccttgaggcgcagcgccgtggc
atccccgtgatgagcgaggtggagctggcatggcaactgcgtgtgaacgccgattccacc
ggcgaacctgcacgttggatcggcatcaccggaaccaatggcaagacctccaccacggaa
atgacctccgagatgcttaccgcctgcggactcaccgcaccggccgtcggtaacatcggc
aaggcggtctcacatgccgcggtcgatcccgccaatgacgtgctatgcgttgaattgagc
tccttccaactgcatttcacggattcgctcgcattggatggtgcggccatcaccaacatc
gccgatgatcatcttgactggcatggaggcattgacaactacgcggccgataaggcgaag
gtgttccatcgtgccagcaaggcactggtctacaatgccgacgacattcgtgtcaccgaa
ttggccgaacgggccgaaacggcggagggttgccgccgtatcggatttacgttgcataag
ccggaggcgggccagatcggcatcgtcgacggttggatcgtcgatatgagcggcgttgcc
ggcggcgaaccggatcagcccgtgaaagtggccaaaatcgccgacttcacgcatctgacc
gagccggatggcacggtatatccgcatctgcttgcggacgcgctgaccgcgctggcgctg
gcattgggattgggcgtcgacaaaggcacggccatcgccgcgttgcagcggttcacgccg
ggtggccatcggattcagaccgtcgccacggcccacgagtccgatggcggcatcattcgt
ttcgtcgatgattccaaagctacgaatgcgcatgcggccaaggcctcgctgaacagtttc
gccgacaagtccgtggtgtggatcgccggtggtcttgccaagggaagccgtttcgaacgg
cttgtagccgatcaggcgcacaccatcaaggcggccgtcatcatcggcgaggaccagcag
ccgatgcttgacgccttcaaggccagcgccccgcagattccattgaccgtcatcgatccg
gcggataagtccaccgtcatggccagggccgtgaacgcggccggcgcatatgccgaatcg
ggcgatgtggtgcttatggctccggcttgcgcatccatggaccagttcgtatcgtatgcc
gatcgcggtaaccagttcgcagacgaggcacgacgatgggtgagcgagcatggcgaagcc
taa
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