Bifidobacterium dentium Bd1: BDP_1546
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Entry
BDP_1546 CDS
T01143
Symbol
murF
Name
(GenBank) murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
bde
Bifidobacterium dentium Bd1
Pathway
bde00300
Lysine biosynthesis
bde00550
Peptidoglycan biosynthesis
bde01100
Metabolic pathways
bde01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BDP_1546 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BDP_1546 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BDP_1546 (murF)
Enzymes [BR:
bde01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
BDP_1546 (murF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CbiA
Motif
Other DBs
NCBI-ProteinID:
ADB10140
UniProt:
D2Q5C5
LinkDB
All DBs
Position
complement(1728189..1729688)
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AA seq
499 aa
AA seq
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MNSNPTMMPMGLAEIEQAVHGRLVTAEGISSNGAMATSACSDSRQVREGSVFVAIAGERV
DGHDFVSKVGAQGAVAALVDHEVADAGVPQIVVDDTVRALGELAKHNLERRRAIGSPFTV
IGITGSVGKTTTKDLMASLLSAMGETVAPVGSFNNEIGLPLTALKVNAGTRFLVAEMGAN
HVGEIANLTSLVPPDIAVVLKVGVAHLGEFGSAERIAQAKSEIVKGLVPGGVTVLNANDE
HVAAMSGIAPGEVLWFGLPQRRTPDRMVAAENVRCDELDHPSFELRDAEGECAKVNLGIC
GMHNVMNALAAATVVHRLGMPLDRIAAGLADVKRISPHRMAVSAIVKPEARFTLIDDSFN
ANPDSMKAGLDGLIRWHANDERQPFRIAVLGAMLELGPDERALHEQVGSYAVQGGVNALI
AVGSRGDDALDALAEAMAQGGKQVGDVRCAVDWAHDIDQADALVSRLATEHAGTVVLLKG
SHASGLSALAERWQPFAAE
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagcaacccgaccatgatgccgatgggccttgccgaaatcgagcaggccgtccat
ggacggctggtgacagcggaggggatctcgtcgaacggggccatggcgaccagcgcatgc
agcgattcccgtcaggtccgtgaaggctcggtgttcgtggccatcgccggcgagcgcgtg
gacggtcacgacttcgtgtcgaaggtcggtgcacagggggccgttgcagcgttggtcgat
catgaggtggccgatgcgggcgtgccgcagattgtggttgacgatacggttcgcgcgctg
ggtgagttggctaagcataatctggaacgccgtcgtgcgataggttcgccgtttaccgtg
atcggcatcaccggttccgtgggcaagaccaccactaaggatctgatggcatcgttgctg
tcggccatgggtgagacggtggctccggtcggttcgttcaacaatgagatcggtttgccg
ttgactgcgttgaaggtcaatgcgggcacgcgttttctcgtggcggagatgggtgccaac
cacgtgggcgagattgccaatcttacgagtctggtgcctccggacattgccgtggtgctg
aaggtcggcgtggcgcatctgggggaattcggctcggcggagcgcattgcgcaggcgaaa
tccgaaatcgtcaagggcttggtgccgggcggcgtgaccgttttgaatgccaatgacgag
catgtcgcggccatgagtggcatcgctccgggtgaggtgctgtggttcggtctgccgcag
cggcggactcccgatcgcatggtcgccgccgagaacgtacgttgtgatgagcttgatcac
ccgtctttcgaactcagggatgccgagggcgagtgtgccaaggtcaatctggggatttgc
ggaatgcataatgtgatgaatgctcttgccgccgccaccgtggtgcataggctgggtatg
cctctggacaggatcgccgctggattggcggatgtcaagcgcatcagcccgcaccgcatg
gccgtgtccgccattgtcaagccggaggcgaggtttacgctgatcgatgactccttcaac
gccaatcctgattccatgaaagccggcttggatggtctgattcgctggcatgccaacgat
gagcgacagccgttccgcattgcggtgctgggtgccatgcttgagctcggtcccgatgag
cgtgcgttgcacgagcaggtgggatcatatgccgtgcagggcggcgtcaacgcgctgatc
gccgtcggcagccgtggtgacgatgcgcttgacgccttggccgaagccatggcgcagggt
ggaaagcaggtcggtgatgtgcgttgtgcggtggattgggcccatgacatcgatcaggcg
gacgcactggtgtcccggctggcgaccgagcatgcgggtacagtggtgttgctcaaggga
tctcacgcctcggggctgagcgctctggcggaacgttggcagccattcgccgcggaatag
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