Bifidobacterium dentium Bd1: BDP_1694
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Entry
BDP_1694 CDS
T01143
Symbol
nrdD
Name
(GenBank) nrdD Anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
bde
Bifidobacterium dentium Bd1
Pathway
bde00230
Purine metabolism
bde00240
Pyrimidine metabolism
bde01100
Metabolic pathways
bde01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
BDP_1694 (nrdD)
00240 Pyrimidine metabolism
BDP_1694 (nrdD)
Enzymes [BR:
bde01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
BDP_1694 (nrdD)
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
RecO_C
DUF2894
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
ADB10286
UniProt:
D2Q5S1
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All DBs
Position
complement(1912457..1914856)
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AA seq
799 aa
AA seq
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METQVLGAMNATSATTAEKVLVEKRDGRVVDFDPINIISAVKSAFADLDKKIGPQEEQMI
RGIANQVEAEIKERYNGPAKIEDIQNLVEHGLIEDHLYDVARTYTNYRLNKDIERAKATD
INEAVSRLVNRDESLVRENANKDSNVYSTQRDLLAGAVSKASAFSMLPDAVSNAHMKGDI
HFHDADYSPFTAQSNCSLPSYWDMLANGFTLGNAPMGSPNSISIAATQITQIMKDVASSQ
YGGQTANRADEHLAEYAKKDYAKFLEQAHEIMPDDLPIEIAERQVTLSKNVEPKRLHFEA
DRAPLPMDEPFHKEAGRLEQLREVWAKIQTRKAIYDAMQTMEYQINSNRVSNGQTPFVTV
GFGLGTDWFSREVQRAIFLNRIRGLGSEHHTAIFPKLVFSVKHGINADEGDPNYDMKQLA
LECATKRMYPDVIFYENIVKITGSFKAPMGCRSFLQGWIDPKTGEDVEDGRMNLGVVTVN
VPRIALESHGDKERFWKIFDERMAVAHQALQYRIMRCKQAAPVNAPTLFRFGAFGRLGAS
DSVDQLFRNERATVSLGYIGLYEATSVFYGKNWMRDHGWDPQGKEFALSIVRRMNELCKE
WCKAEGYHYSVYSTPAESLTDRFNRMDREKFGEVEGVTDHDFYTNSFHYPVWLQPTPMEK
LNYEKDFPYLASGGFINYCEFPCLQANPKALEAVWDYAYNIGIGYLGTNTPIDHCFMCGF
QGDFEPTEEGFKCPECGNSDPDKCNVTKRTCGYLGNPVQRPMVHGRHEEIAHRVKHMSGE
TGHVMLQDGSEREWFEEAK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcaggttctgggcgcgatgaacgcgacctccgcaaccactgcggagaaagtg
ctcgtcgagaagcgcgatggtcgtgtggtcgatttcgatccgattaacatcatcagcgcg
gtgaagtccgccttcgccgatctcgacaagaagatcggcccgcaggaagagcagatgatc
cgtggtatcgccaaccaggtcgaggctgagatcaaggaacgctacaacggtccggccaaa
atcgaggacatccagaatcttgtggagcatggcctgatcgaggatcacctgtacgacgtg
gcccgcacctacaccaactatcgtctgaacaaggatatcgaacgcgccaaggccaccgat
atcaacgaggccgtaagccgactggtgaatcgtgacgaatccttggtgcgtgagaacgcc
aacaaggattccaacgtgtactccacccagcgtgacctgctggccggagccgtctccaag
gcatccgccttctccatgctgccggatgccgtgtcgaacgcgcatatgaagggcgacatc
cacttccatgatgccgattactcgccgttcaccgcacaatccaactgctcgctgccgagc
tattgggatatgctcgccaacggctttaccttgggcaacgccccgatgggttcgccgaac
agcatcagcattgcggccacgcagatcacccagatcatgaaggacgtggcctccagccag
tacggagggcagaccgccaaccgtgccgacgagcatctggccgaatacgccaagaaggat
tacgccaagttcctggagcaggcccacgagatcatgcccgacgacctgccgatcgaaatc
gccgagcgtcaggtcacattgtccaagaacgtcgagccgaagcgcctgcacttcgaggcc
gatcgtgctccgctgccgatggacgagccgttccacaaggaagccggacgcctggaacag
ttgcgcgaggtctgggcgaagatccagacccgcaaggccatctatgacgccatgcagacc
atggaataccagatcaactccaaccgtgtgtccaacgggcagaccccgttcgtgaccgtc
ggtttcggtttgggcaccgactggttctctcgtgaggtacagcgtgccatcttcctcaac
cgcatccgcggcctcggttccgaacaccacaccgccatcttcccgaagctggtgttctcc
gtcaagcatggcatcaacgccgacgagggcgatccgaactacgacatgaagcagctcgcg
ctcgaatgcgccaccaagcgcatgtacccggatgtcatcttctacgagaacatcgtgaag
atcaccggatccttcaaggctccgatgggctgccgttccttcctgcagggatggatcgac
ccgaagaccggcgaggacgtcgaagacggccgtatgaacctcggcgtcgtgaccgtgaac
gttccgcgcatcgcgttggaatcccacggcgacaaggaacgtttctggaagatcttcgac
gagcgcatggccgtcgcccatcaggcattgcagtaccgcatcatgcgatgcaagcaggcc
gcaccggtcaacgccccgaccctgttccgcttcggtgcattcggtcgtcttggtgccagc
gacagcgtcgaccagctcttccgcaatgaacgcgccaccgtatccctcggatacatcggc
ttgtatgaggcgaccagcgtgttctatggcaagaattggatgcgcgaccacggctgggac
ccgcagggtaaggaattcgccctgtcgatcgtgcgccgcatgaacgaattgtgcaaggaa
tggtgcaaggccgaggggtatcactattccgtgtactccacgccggccgaatccctgacc
gaccgcttcaaccgcatggaccgcgagaagttcggcgaggtggaaggcgtgaccgaccac
gacttctacaccaattccttccattatccggtgtggctgcagcctaccccgatggaaaag
ctcaattacgagaaggacttcccctatctcgcttccggcggcttcatcaactactgcgag
ttcccgtgcctgcaggccaatccgaaggctctcgaggccgtatgggattacgcctacaac
atcggcatcggctaccttggtacgaacactccgatcgaccactgcttcatgtgtggtttc
cagggcgacttcgaaccgaccgaagaaggcttcaagtgcccggagtgcggcaactccgac
ccggacaagtgcaatgtgaccaagcgcacctgcggctatttgggtaacccggtgcaacgc
ccgatggtgcacggtcgccatgaggagatcgcccatcgcgtcaagcacatgagcggtgag
accggtcatgtcatgctgcaggacggctccgaacgcgaatggttcgaagaggccaagtaa
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