Bifidobacterium dentium Bd1: BDP_1914
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Entry
BDP_1914 CDS
T01143
Symbol
pdxS
Name
(GenBank) pyridoxal biosynthesis lyase PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
bde
Bifidobacterium dentium Bd1
Pathway
bde00750
Vitamin B6 metabolism
bde01100
Metabolic pathways
bde01240
Biosynthesis of cofactors
Module
bde_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
BDP_1914 (pdxS)
Enzymes [BR:
bde01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
BDP_1914 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
NMO
TetR_C_27
NanE
IGPS
Motif
Other DBs
NCBI-ProteinID:
ADB10494
UniProt:
D2Q6C9
LinkDB
All DBs
Position
complement(2173987..2174862)
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AA seq
291 aa
AA seq
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MANNRNELNKNLAQMLKGGVIMDVTTPEQARIAQDAGACAVMALERIPADIRAAGGVSRM
SDPAMIKGIQEAVSIPVMAKVRIGHIAEARILQAIEIDYIDESEVLSPADDVYHIDKNQF
DVPFVCGAKNLGEALRRIAEGASMIRTKGEPGTGDVIQAVRHMRTMNKQIRELVSLRDDE
MYEAAKQLAVPYDLAKYVHDNGRLPVVNFAAGGVATPADAALMMELGAEGVFVGSGIFKS
GDPAKRAAAIVQATANWQDADLLARLSENLGEAMVGINEDEIETIMAARGE
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaacagaaatgaactgaataagaatctggcgcagatgctcaagggcggcgtg
atcatggacgtcaccactccggagcaggcgaggatcgcgcaggatgccggcgcgtgcgcg
gtgatggcgctcgagcgcatcccggctgacatccgcgccgccggtggcgtctcccgcatg
agcgatccggccatgatcaaaggcattcaggaagccgtgtccattccggtcatggccaag
gtgcgcatcggccacatcgccgaggcgcgcattctgcaggccatcgaaatcgactatatc
gacgaatccgaagtgctcagcccggccgatgacgtgtatcacatcgataagaatcagttc
gacgtgccattcgtgtgcggtgcgaagaatctgggtgaagcgttgcgacgtatcgccgag
ggtgcatccatgatccgtaccaagggcgaaccgggcacgggcgacgtcatccaggccgta
cgccatatgcgcaccatgaacaagcagattcgcgagctcgtctccctgcgcgacgacgag
atgtacgaggcggccaagcagctggccgtgccgtatgacctggccaagtatgtgcatgac
aacggccgcctgccggtcgtcaacttcgccgcaggcggtgtcgcgaccccggctgacgcg
gccctcatgatggagcttggcgcggaaggtgtgttcgtgggctccggcatcttcaagtcc
ggcgacccggccaagcgcgccgccgccatcgtgcaggccaccgccaactggcaggacgcc
gacctgcttgcgcgcctgtccgagaatctcggcgaggccatggtcggcatcaatgaggac
gagatcgagaccatcatggccgccaggggtgagtga
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