Bifidobacterium dentium Bd1: BDP_1931
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Entry
BDP_1931 CDS
T01143
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bde
Bifidobacterium dentium Bd1
Pathway
bde00300
Lysine biosynthesis
bde00470
D-Amino acid metabolism
bde01100
Metabolic pathways
bde01110
Biosynthesis of secondary metabolites
bde01120
Microbial metabolism in diverse environments
bde01230
Biosynthesis of amino acids
Module
bde_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BDP_1931 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BDP_1931 (lysA)
Enzymes [BR:
bde01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BDP_1931 (lysA)
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Ortholog
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ADB10508
UniProt:
D2Q6E3
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All DBs
Position
complement(2196373..2197947)
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AA seq
524 aa
AA seq
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MPITPIWPAGSAVNDNGEITFHGRTAESLLDEFGSPLYVIDTDEVRARASKFVTSAGNAF
NNTVTHVSFAGKALLSKEICRIVTEAGMLIDTCTMGEMRIALAAGVPGRRLVLHGNNKSD
EEIALAIEQGFAKIVVDEPNEPARIADIAKRLGKRARVMLRVTSGIHAGGHEFVSTAHED
QKFGVALLPVDADASKLSVLDDLTDVTPAGSNARLGEQSGEAGSDRALRYDIKYPYDMSH
EKVSEGDRKLAEAMTMVADGPALAVLKDIQRHQDVLELVGVHSHIGSNIHDADAFIQAAK
RMMLLRKTFYATDAYTLPEVDLGGGYSVAYTDGEDSMDIDVELGRLADAVTTVNRALGMP
APVISFEPGRWTVAPTGVTLYRVGTVKPVRLNGDATDKAGNPVHERVYVSVDGGMSDNIR
PALYGSDYTARLANRKGSDDTKLCRVVGMHCESGDIVVNEVRLPADITRGDILAVPVTGA
YGRTMASNYNQALIPAVVGIGETDAHVMIRRQSIDDLLSWDVSR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcaccccgatttggccggccgggtcggccgtgaacgacaacggtgaaatcacc
ttccacggtcgcaccgccgaaagcctgctcgacgaattcggctcgccgctctacgtcatc
gacaccgatgaagtgcgtgcgcgcgcctcgaaattcgtaacatccgcaggcaatgcgttc
aacaacaccgtcacgcacgtaagcttcgccggcaaggcattgctgtccaaggagatctgc
cgcatcgtcaccgaagcgggcatgctcatcgacacctgcaccatgggcgagatgcgcatc
gcgctcgccgcaggcgttccgggccgtaggctcgtattgcacggcaacaacaaatccgat
gaggaaatcgcgctcgccatcgaacagggattcgccaaaatcgtggtggacgagccgaac
gagcccgctcgcatcgccgacatcgccaaacgtcttggcaagcgagcacgggtgatgctg
cgcgtcacctccggcatccatgcgggcggtcacgaattcgtttcgaccgcgcacgaggat
cagaaattcggcgtggcgttgctgccggtggacgccgacgcgagcaagctgagcgtgctg
gacgatctgaccgacgtgactccggcaggaagcaatgcaaggctgggggagcagtcgggc
gaggccggttccgaccgtgccctgcggtatgacatcaaatacccgtatgatatgagccac
gagaaggtttcggaaggcgatcgcaaacttgccgaagccatgaccatggtggccgacgga
ccggcgctcgccgtgctgaaggatatccaacgccatcaggacgtacttgaactggtcggc
gtgcactcgcatatcggctccaacattcatgatgcggatgccttcattcaagccgcgaaa
cgcatgatgctcctacgcaagaccttctacgccaccgatgcgtacacgttgccggaggtc
gatctgggcggcggctattccgtggcctacaccgatggcgaggattccatggacatcgac
gtggaactcggccgtcttgccgacgcggtcaccaccgtgaaccgtgcgctcggcatgccc
gccccggtcatctccttcgaaccgggtcgttggacggtcgcgccgaccggcgtgacgctc
taccgtgtgggcaccgtcaaaccggtgcggctgaatggcgacgctaccgacaaggccggc
aatccggtgcatgaacgtgtgtacgtatccgtcgacggcggcatgagcgacaacattcgt
cccgccctgtacggctccgactacaccgcacggcttgccaaccgtaagggttcggacgac
accaaactgtgccgtgtggtgggcatgcactgcgaatccggcgacatcgtcgtgaacgaa
gtgcggctgccggccgacatcacgcgcggcgacatcctcgcggtgccggtcaccggcgcg
tatgggcgcaccatggccagcaactacaatcaggcgttgattccggcggtcgtcggcatc
ggcgagaccgatgcgcatgtgatgattcgccgtcagagcatcgacgatctcctcagctgg
gacgtcagccggtaa
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