Bifidobacterium dentium Bd1: BDP_1976
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Entry
BDP_1976 CDS
T01143
Symbol
valS
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
bde
Bifidobacterium dentium Bd1
Pathway
bde00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BDP_1976 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bde01007
]
BDP_1976 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bde03016
]
BDP_1976 (valS)
Enzymes [BR:
bde01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
BDP_1976 (valS)
Amino acid related enzymes [BR:
bde01007
]
Aminoacyl-tRNA synthetase
Class I (U)
BDP_1976 (valS)
Transfer RNA biogenesis [BR:
bde03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BDP_1976 (valS)
Prokaryotic type
BDP_1976 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1f
tRNA-synt_1_2
Motif
Other DBs
NCBI-ProteinID:
ADB10551
UniProt:
D2Q6L0
LinkDB
All DBs
Position
2240597..2243386
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AA seq
929 aa
AA seq
DB search
MTESQANTINANLTPLPDKVGVDGLEDKWRGVWDEGGVYKFRNTRDRKAVYSIDTPPPTV
SGHLHVGHVFSYTHTDIIARFKRMNGFDVFYPMGWDDNGLPTERRVQNYYGVRVDTSLKY
DPNFVPPFEGTDGKKIDAKDQVPISRKNFIELCEKLTAQDEKQFEALWRSLGLSIDWSQT
YHTIGEHPQRVAQKAFLRNLARGEAYQKDAPGLWDVTFQTAVAQAELESREYPGFYHKIA
FRFEDGTPIYIETTRPELLAACGALIAHPDDDRYKKYFGQYVYSPLFRVKVPILAHKAAE
MDKGAGIAMCCTFGDVTDVEWWRDLNLPLRSIIQRNGRIVMDTPDWIEDGKGREIFQETA
GKTTFSARKIIVDALRESGDLDGEPTPTKRMTNFYEKGDKPLEIVTSRQWYLKNGGTDQQ
LNAELIERGKELNFHPDFMRVRYENWVHGLNGDWLISRQRFFGVPFPLWYPVKEDGTADY
DHPIVPSEDILPIDPTDDVPEGYSEDQRDVPGGFTAEQDIMDTWATSSLTPQIVTRWEEP
GEENRAIFNATFPMDLRPQGQDIIRTWLFSSVDRAHLENKCLPWASATLSGWILDPDHKK
MSKSKGNVVVPDKPIKQFGADAVRYWAAAARLGLDATYDEGQMKIGRRLAIKLLNATKFA
LAIGREDENHHVGAAATASWNPADVTEPLDRAAMAKMAHVVSEATKNLNNYEHSKALEVI
ENYFWQFCDDYIELVKNRAYGTADSTGHVPSEKAVKSARTALGLGLDAFTRLLAPYLPYA
TEEVWSWMHEGEGSVHRAAWPKAETYAAAAFKASPELLTHAGEALAALRGIKSKAKVSMK
TPILSVKLGVSDEVRGSIESALADIAEAGRVVGRISFVGAAAAAKAIKETAEAAKDAAAE
AKAEAEAAIDVIVADSELGEPPAKKPKNQ
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaagccaagctaataccatcaatgcgaacctcacgccgctgcccgacaaggtc
ggcgtggacggtctcgaagacaagtggcgcggcgtctgggacgaaggcggagtctacaag
ttccggaacacccgcgaccgtaaggccgtctattccatcgacaccccgccgcccaccgtt
tccggccatctgcacgtcggccacgtgttctcctacacgcacaccgatataatcgcccgt
ttcaagcgcatgaacggcttcgacgtgttctatccgatgggctgggacgacaacggcctg
ccgaccgaacgccgtgtgcagaactactatggcgtgcgcgtggacacctccctgaagtac
gatccgaatttcgtgccgccgttcgaaggcaccgacggcaagaagatcgatgccaaggat
caggtgccgatcagccgcaagaacttcatcgaactatgcgagaagctcaccgcccaggat
gagaagcagttcgaggcgctgtggcgctccctcggcctgtccatcgactggtcgcagacc
taccacaccatcggtgagcatccgcagcgcgtggcccagaaggcgttcctgcgcaatctg
gcccgtggcgaggcctaccagaaggacgctccgggcctgtgggacgtgaccttccagacc
gcagtggcccaggccgagctggaatcgcgcgaatatccgggcttctaccacaagatagcc
ttccgtttcgaagatggcaccccgatctatatcgaaaccacccgtccggaactgctggcg
gcctgcggcgcgctgattgcgcacccggatgacgaccgttacaagaagtatttcggccag
tacgtctactcccctctgttccgtgtgaaggtgccgattctggcgcacaaggccgcggag
atggacaagggcgccggcatcgccatgtgctgtacgttcggcgatgtgaccgatgtcgaa
tggtggcgtgatctgaatctgccgctgcgttccatcatccagcgtaacggccgtatcgtc
atggataccccggactggatcgaagacggcaagggccgcgagatcttccaggagacggcc
ggcaagaccacgttctccgcacgtaagatcatcgtcgatgcactgcgtgaatccggcgat
ctggacggcgagccgacgccgaccaaacgtatgacgaacttctacgagaagggcgataag
ccgctcgaaatcgtcacctcccgccagtggtatctcaagaacggcggcaccgaccagcaa
ctgaacgccgagttgatcgagcgtggcaaggagctgaacttccatccggacttcatgcgc
gtgcgctatgagaattgggtgcatggcctcaacggcgactggctgatctcccgccagcgc
ttcttcggcgtgccgttcccgctgtggtacccggtgaaggaggacggcaccgccgactac
gatcacccgatcgtgccgagcgaggacattctgccgatcgatccgaccgacgacgtgccg
gaaggctacagcgaggaccagcgtgacgtgccgggcggcttcactgccgaacaggacatc
atggacacctgggccacctcgtcgctcaccccgcagatcgtgacccgctgggaggagccg
ggcgaagagaaccgggccatcttcaacgccaccttcccgatggatctgcgcccgcagggc
caggacatcatccgtacatggctgttctccagcgtggatcgcgcgcatctcgaaaacaag
tgcctgccgtgggccagcgccacgctgtcgggctggattctcgatccggaccataagaag
atgtcgaagtccaagggcaacgtggtcgtgccggacaagccgatcaagcagttcggcgcc
gacgcggtgcgctattgggctgcggcggcccgtttgggcttggacgccacctacgacgaa
ggtcagatgaagatcggccgccgtctggccatcaagctgctcaacgccaccaagttcgcg
ctggccatcggccgcgaggacgagaaccatcatgtgggcgctgcggccaccgcaagctgg
aatccggccgacgtgaccgagccgctggatcgtgccgccatggccaagatggcccatgtg
gtgagcgaagccaccaagaatctcaacaactatgagcattccaaggctcttgaggtcatc
gagaactacttctggcagttctgcgacgattacatcgagctggtcaagaaccgcgcctac
ggtaccgccgattccaccggccatgtgccgagcgagaaggccgtgaagtccgcacgcacg
gctctgggcctgggtctggacgcattcacccgcctgctggccccgtacctgccgtacgcc
actgaagaagtgtggagctggatgcatgagggcgagggttccgtgcatcgcgccgcatgg
ccgaaggccgagacgtatgccgccgccgcgttcaaggcgtctccggagctgctcacccat
gccggtgaggcgctggccgcgctgcgtggcatcaagtcgaaggccaaggtttcgatgaag
accccgattctgtcggtgaagctgggcgtctccgacgaggtgcgcggctccatcgagagc
gcactggccgatatcgccgaagcgggtcgcgtggtgggccgcatctccttcgtgggcgcc
gcagcggcggccaaggccatcaaggagaccgctgaagccgccaaggatgccgcggcggag
gccaaggccgaggcagaggccgcgatcgatgtgatcgtggctgacagcgaactcggtgag
ccaccggccaagaagccgaagaaccagtaa
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