Burkholderia diffusa: WI26_01330
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Entry
WI26_01330 CDS
T04698
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bdf
Burkholderia diffusa
Pathway
bdf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WI26_01330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdf03019
]
WI26_01330
03400 DNA repair and recombination proteins [BR:
bdf03400
]
WI26_01330
Enzymes [BR:
bdf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WI26_01330
Messenger RNA biogenesis [BR:
bdf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WI26_01330
DNA repair and recombination proteins [BR:
bdf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WI26_01330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AOI58908
LinkDB
All DBs
Position
1:304122..305969
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AA seq
615 aa
AA seq
DB search
MSRALEILDEVFGYSAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREAGQ
GAGIVVSPLIALMQDQVAALSEVGVRAAYLNSTLSGAEAAATERALREGEIDLLYVAPER
LMTGRFLELLERAKIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPSVPRIALTATAD
AITRDEIIHRLALDDARVFVSSFDRPNIRYRIVEKDNARAQLLDFIRAEHTNADGTTDTG
VVYCLSRRKVEETAEWLKAQGVRALPYHAGMEFEVRQKHQEMFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPANAWMAYGLGDVVQQRKMIDESDADD
AHKRVQTSKLDALLGLCETISCRRVRLLNYFGEASQPCGNCDTCLEPPDSWDATREAQMA
LSCVFRAQRASGFNFGSSHLIEILRGGRTEKVLQRGHDQLSTFGIGASLSEPEWRAIFRQ
LVAYGYLAVDHGGFGALMLTEAAKPVLKNEEKVTLRRYVKPQRTRQSSSRSGTRVDPTAG
MGTRERARWDALRAWRAETAKSDGVPAYVIFHDATLAEIARNAPETIDDLRHIPGMGVRK
LERFGDEIIDVVESA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgccctcgaaatcctcgacgaagtctttggttattccgcatttcgcggccag
cagggcgagatcgtcgaacacgtcgccggcggcggcgattgcctcgtgctgatgccgacg
ggcggcggcaaatcgctgtgctaccagattccggcgctgctgcgccgcgaagccggccag
ggcgccggcatcgtggtgtcgccgctgatcgcgctgatgcaggaccaggtcgccgcgctc
agcgaggtcggcgtgcgggcggcctatctgaactcgacgctgtcgggcgccgaggctgcg
gcgaccgagcgcgcgctgcgcgagggcgagatcgacctgctgtacgtcgcacccgagcgg
ctgatgactgggcgcttcctcgagctgctcgagcgcgcgaagatcgggctgttcgcgatc
gacgaggcgcattgcgtgtcgcagtgggggcacgacttccgtcccgaatacatccagctg
tcggtgctgcacgagcgcttcccgtcggtgccgcgcatcgcgctgacggccaccgccgac
gcgatcacgcgagacgagatcatccatcgtctcgcgctcgacgacgcgcgagtgttcgta
tcgagcttcgaccggccgaacatccgttaccggatcgtcgagaaggacaacgcgcgcgcg
cagctgctcgacttcatccgcgcggagcacacgaacgcggacggcacgaccgacacgggc
gttgtttactgcctgtcgcgccgcaaggtcgaggaaacggccgaatggctgaaggcgcag
ggcgtgcgcgcgctgccgtaccacgcggggatggagttcgaggtgcggcagaagcatcag
gaaatgttccagcgcgaggaaggcatcgtgatgtgcgcgaccatcgcgttcggcatgggc
atcgacaagcccgacgtgcgcttcgtcgcgcacctcgatttgccgaagagcgtcgaaggc
tactaccaggaaaccggccgggcgggccgcgacgggatgccggcgaacgcgtggatggcg
tatgggctcggcgacgtcgtccagcagcgcaagatgatcgatgaatccgatgcggacgat
gcgcacaagcgcgtgcagacgtcgaagctcgatgcgctgctcgggctgtgcgagacgatc
tcgtgccggcgtgtgcggcttctgaactacttcggcgaggcgagccagccgtgcggcaac
tgcgacacgtgcctcgagccgcccgattcatgggacgcgacgcgcgaggcgcagatggcg
ctgtcgtgcgtattccgcgcgcagcgcgcgagtggtttcaatttcggctcgagccatctg
atcgaaatcctgcgcggcggccgcaccgagaaggtgctgcagcgcggccacgaccagctc
agcacgttcgggatcggcgcatcgctgtccgagcctgaatggcgcgcgatattcaggcaa
ctcgtggcgtacggctatctggcggtcgaccatggtggcttcggcgcgctgatgctgacc
gaggccgcgaagccggtgctgaagaacgaggagaaggtcacgctgcgccgctacgtaaag
ccgcagcgcacgcgccaatcgtcgagccgcagcggtacgcgggtcgacccgacggccggc
atgggcacccgcgagcgggcacgctgggacgcgctgcgcgcgtggcgcgcggaaaccgcg
aagtccgacggcgtgccggcctacgtgatcttccacgacgcgacgctggccgaaatcgcg
cgcaacgcgccggagactatcgacgatctgcgccatatccccggcatgggtgtgcgcaag
ctcgaacgcttcggcgacgagatcatcgacgtcgtcgaatcggcatga
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