Burkholderia diffusa: WI26_01860
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Entry
WI26_01860 CDS
T04698
Name
(GenBank) sugar-binding protein
Organism
bdf
Burkholderia diffusa
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
Colicin-DNase
WHH
Motif
Other DBs
NCBI-ProteinID:
AOI56431
LinkDB
All DBs
Position
1:399029..403669
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AA seq
1546 aa
AA seq
DB search
MAQQLPPGAEKEQAVTWLSDVSPKDVAAVGNRFDAWLRRISGNHITFEDVKTFAGAVPIV
GNIMAMVDALGDIAEIVEKRGGQVLDYMSLAINLLGIIPIPPTLAPFRMSARPLLALVRH
ELLATRNNLGAAIISVLVTHINATCATEIEDFLNKLKAGLVELLDGCASKSEEIMLALAT
GMDKALHGQLFDANANVKRQEQLAKKMADNRPWYSPSRVGDGIQFAYEGTKALGKKVVNK
TAGTVAKLAPDAWLEPFRGTVTFLRTEAPKIATSIRSLAGSEEGKMMWLVLQLIEAVGRV
KARSKLHEQSADVKAAGKSQAKKTRGQEGLEKTEAQAPAEGAGKSTCKACGVGASLASID
FAFGDETFSHVDFDLPGALPLVWGRTYRSRLSAYDNGELGARWITPYTTRIDVKNGQWIY
RDAEGRSIDYPALAVGAVHDDLSENLTLSRLDDTWVTVAYGHDELHVYERRGDAFRLAMQ
KDRAGNTITCDYDAVDRLARLIDASGNVLAFEHDKHGRIVLIEQVLEDGARRALASYEYD
ANGDLVRAVDRHGNARTYQYHRHLVTRYTDRTGRGMTLEWDGADAEDNADAKCIREYADD
GSLDLRLAWHPNIRLTYVTDALGQMTRYYFNIHGYVYRIIHPDGNQEWFRRDAHHNLVLH
IRQDGSIERRDYDARGNLIQHERADGSIVEMAYDDKDQMIRLVDPNGSVWERKYDDAGNL
VEEIDPLGHATKYGYNGKGLPTEITDAKGGSKALEYNDAGQLASYTDCSGKKTEWRYDDI
GRLIESKDASGGMVAYRYGPNGQLTEIRSPAGVEQVQYDAEGRLLRHTDQLNRSTRYGYD
AVGRIASRADALGQTLAYRYDRLGRLSALTDANFATYQFHYDPAGRLIEEVGFDGKSTRY
QYDKETGSLVSVDEAGCVTAIDVDANGRLMKRVAGQSEERFAYDPSGRLIDAVNRYSRVQ
FFFDPAGNLVREHHAYDLFGERRSYVWHHEYDELGNRRRTVRPDGHVVDWLMYGSGHVHG
MLLDGDERVQFERDDLHRETVRVLSSKVGQRTHYDPAGRVLQQTIQRATSPAPLAERRYR
YDTAGQLSRIEDSHKGGIDYRYDPVGRLIEAISPVAKERFAFDPASNIIDPVRSTETPAS
RPSPVRPDSTLPVEVPKVLGNLLKAYAGMHFEYDARGNLVRKRTPAGEQEYEWDQFNRLM
SARVAETSRQSQARYFYDAFGRRIAKEVDGERTVFGWDGDTLAYESDGERGTHYLYEPGT
FVPLAQYVAEPVEGIATPEWKSTDRYVPEEDPLQKLPERRGDAVVFYYHCDQIGTPQLLT
DDDGDVVWEASYKAWGEAREVIARASKAAGIVARNPLRFQGQQGDEETGLHYNRHRYYDP
NSGRFVSKDPIGLSGGINVYQYAQNPVAWIDPLGLRKRPGCPGKFHSFHDFDLSKDKFFA
SDAVQFRLANKALIDRMNTDAAFRRDMLGRNPALSDWMKDPDLSKSPVGMTWHHNDEPGK
LNLVSFDDHRDNHGIYHPDGTGGRNKWGGGEPGRRGKLDSSTGCPK
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacaacttccaccgggcgccgagaaggaacaggccgtcacctggctcagtgat
gtttcgccgaaggacgtcgcggcggtcggcaaccgcttcgacgcatggttgcgccgcatc
agcggcaatcacatcacgttcgaggatgtgaagacgtttgccggcgcggtgccgatcgtc
ggcaacatcatggcgatggtcgacgcgcttggcgatattgccgagattgtcgagaagcgc
ggcgggcaggtgctcgactacatgagtctcgcgatcaatctgctcggcatcattccgatt
ccgccgacgctcgcaccgttccggatgtcggcgcgtccgttgctcgcgctcgtgcgtcac
gaattgctggcgacgcgcaacaacctcggtgcggcgatcatctccgtgctggtcacgcac
atcaatgcgacgtgcgcgaccgagatcgaagattttctcaacaagctgaaggccggcctc
gtcgagctgctggacggctgcgcgtccaagtccgaggagatcatgctcgcgctggcgacg
ggcatggacaaggcgttgcatggccaactgtttgacgccaacgcgaatgtgaagcgccag
gagcagcttgcgaagaagatggcggacaaccggccgtggtatagcccgagccgtgtcggc
gacggtatccagttcgcatatgaaggcaccaaggcgctcggcaagaaggtggtcaacaag
acggcgggcacggtggcgaagctcgcaccggatgcgtggctcgaaccgtttcgcggcacg
gtgaccttcttgcggaccgaagcgccgaagatcgcgacgtcgatccgttcgcttgccggc
agcgaagaaggcaagatgatgtggctcgtgttgcaactgatcgaagccgttgggcgcgtc
aaggcacgctcgaagcttcatgagcagagcgccgacgtcaaggcggccgggaagagccag
gcgaagaagacgcgcggccaggagggactcgagaaaaccgaagcgcaagcgccggccgaa
ggagcgggaaagagcacgtgcaaggcttgcggtgtcggcgcgtcgctggcttccatcgat
ttcgcgttcggcgacgaaacgttctcgcatgtggatttcgacctgccgggcgcgctgccg
ctcgtgtggggacgcacttatcgctcgcggttgtcggcctatgacaatggcgaactgggt
gcgcgatggatcacgccttatacgacacgcatcgacgtcaagaacggtcaatggatctat
cgcgatgcggaggggcgcagtatcgactatccggcactcgcggtcggcgcggtgcacgac
gatctatcggaaaacctgacgctgtcgcgactcgacgatacgtgggtgacggtcgcgtac
ggccatgacgaactgcacgtgtacgagcgccgtggagatgcgttccggctcgcgatgcaa
aaggatcgcgctggcaacacgattacgtgcgactacgatgccgtcgatcgactggcgcgc
ttgatcgacgcgagcggcaacgtgctcgcgttcgagcatgacaagcatggccggatcgtg
ctgatcgagcaggtgctcgaggatggcgcacgccgcgcactggcgagctacgaatacgac
gcgaacggcgatctcgtgcgtgcagtcgatcgccacggcaatgcgcggacgtatcaatat
caccgccatctggtgacgcgctataccgatcggaccggccgcggcatgacgctcgaatgg
gatggcgcggatgccgaagacaacgcggatgccaaatgcatacgcgaatatgcggatgac
ggcagcctcgatctccggctcgcatggcatccgaatatccgcctgacctacgtgaccgat
gcgctcggccagatgacgcggtactacttcaatatccacggttacgtgtaccggatcatc
catccggacggcaatcaggagtggttccgtcgcgatgcgcatcacaatctggttctgcat
atccgtcaggacggcagcatcgagcggcgggattacgacgcacgcggcaatctgattcag
catgaacgcgccgacggcagcatcgtcgagatggcatacgacgacaaggatcagatgatc
cggctcgtcgacccgaacgggagtgtgtgggagcgcaagtacgacgatgccggcaatctc
gtcgaagaaatcgatccgctcgggcacgcgacgaagtacggctacaacggcaagggcttg
ccgaccgagattaccgacgcgaagggcggctcgaaggccctcgaatacaacgacgccggg
cagctcgcgagctatacggattgctcgggcaagaagaccgagtggcgctatgacgacatc
ggtcgcctgatcgagagcaaggatgcgtcgggcggcatggtcgcttatcgttacggcccg
aacgggcaattgaccgagattcgctcgccggctggcgtcgagcaggtgcaatacgacgct
gaaggccggttgttacggcataccgatcaactgaaccggtcgacgcgatacggctacgac
gccgtcggccgaattgcgagtcgcgcggatgcgctcgggcagacgctcgcgtatcggtat
gaccgtctcggccgcctgagtgcgctcaccgatgcgaactttgcgacgtaccagtttcat
tacgatccggccgggcggctgatcgaggaagtcggcttcgacggcaagtcgacgcgctat
cagtacgacaaggagaccggcagcctcgtttcggtagatgaagccggctgcgtaacggcg
atcgacgtcgatgcgaacggccgtttgatgaagcgtgttgccgggcaaagcgaggaacgg
ttcgcctacgacccaagcggcaggctgatcgacgcggtgaaccgctacagccgcgtgcag
ttcttcttcgatccggccggcaacctcgtgcgcgaacatcacgcgtacgatctgttcggc
gagcggcgcagctacgtctggcatcacgagtacgacgaactcggcaaccggcgaagaacg
gtgcggccggacgggcatgtggtcgattggctcatgtatggttcgggacatgtgcacggg
atgctgctcgatggcgacgagcgtgtgcagttcgagcgcgacgatcttcatcgcgagacg
gtgcgtgtgctgtcgagcaaggtcgggcaacgcacgcattacgatccggccgggcgcgtg
ctgcagcagacgattcaacgagcgacatcgccggcgccgcttgccgagcgacggtatcgc
tatgacacggcggggcagttgtcgcgaatcgaggacagtcacaaaggcgggatcgactat
cgatacgatccggtcgggcgattgatcgaggcgatcagcccggtcgcgaaggaacggttt
gcgttcgatcctgcgagcaacatcatcgatccggtgcggagcacggaaacgccggcttcc
cgtccgagcccggtgcggccggacagcacgttgccggttgaggtgccgaaggtgctcggc
aacctgctgaaggcgtatgcggggatgcacttcgagtacgacgcccgcgggaatctcgtg
cgcaagcgtacgccggccggcgagcaggaatacgagtgggaccagttcaatcgcttgatg
tccgcgcgggttgcggagacgtcgcggcagagccaggcgcggtatttctatgatgcgttc
ggccgccggattgccaaagaggtggacggcgagcgcacggtcttcgggtgggacggtgac
acgctcgcgtacgaaagtgatggcgagcgcggcacgcactatctgtacgagccggggaca
ttcgtgccgctggcgcagtatgtggcggagccggtcgagggaatcgcgacgccggaatgg
aagagtaccgaccgctatgtgccggaggaagatccgctgcagaagctgccggagcggcgg
ggtgatgcggtggtgttctattaccactgcgatcagatcggtacgccgcagttgctgacg
gacgacgatggcgatgtcgtgtgggaagcttcgtacaaggcgtggggtgaagcgcgggag
gtgatcgcgcgggcgtcgaaggcggcggggatcgtcgccaggaatccgttgcggtttcag
gggcagcagggagatgaggagacggggctgcactacaaccggcacaggtactatgatccc
aacagcggccggttcgtcagcaaggacccgatcggtctctcgggcgggatcaacgtctat
cagtacgcacagaacccggttgcgtggattgatccgctgggccttcggaagcgccctgga
tgccccgggaaatttcactcattccacgacttcgatttgtcgaaagacaagttttttgct
agcgatgctgtgcagtttcgcttagccaacaaggcgttgatcgaccggatgaatacggat
gctgcatttcgtcgagacatgttggggcggaaccccgccttgtccgactggatgaaggac
ccagatttaagtaagagtcctgtgggaatgacgtggcatcataacgacgaaccggggaaa
ctgaatctggttagtttcgacgatcatcgcgataaccatggcatttaccatcctgacggg
actggcggcagaaacaagtggggcggcggtgagccaggacgacgaggaaaattggattca
agtacagggtgtccaaaatga
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