KEGG   Burkholderia diffusa: WI26_02165
Entry
WI26_02165        CDS       T04698                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
bdf  Burkholderia diffusa
Pathway
bdf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bdf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    WI26_02165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bdf03400]
    WI26_02165
Enzymes [BR:bdf01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     WI26_02165
DNA repair and recombination proteins [BR:bdf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     WI26_02165
 Prokaryotic type
     WI26_02165
SSDB
Motif
Pfam: UDG DUF6103 LZ_Tnp_IS66
Other DBs
NCBI-ProteinID: AOI56491
LinkDB
Position
1:complement(474858..475763)
AA seq 301 aa
MATRKTLRTPQQASLFDDPVPETAQDDVSAEAPAPAAVGRKPAKKAAATAPASSSPQPAA
AHVPHLAAQFDALPAVWRDVLKPFTDSDAYAPLCRFVDDERAAGKTVYPTDVFRALRLTS
PDDVKVVILGQDPYHGDDRGTPQAHGLAFSVPPAVRTPPSLRNIFKEIAANFGHDTPRHG
CLDSWARQGVLLLNTVLTVERGAAASHAKRGWEQCTDTLIRELANRHRGLVFMLWGAHAQ
AKRALFDASAHCVLEAPHPSPLSAHRGFLGCRHFALANDYLVEAGREPIDWRLPEVAETL
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcaacccgcaagactctccgcacgccgcaacaggcgtcgctgttcgacgatcccgtg
ccggaaacggcgcaggacgatgtttccgccgaggcgcccgcgcccgccgcggtcgggcgc
aagcccgcaaagaaggccgcggcgaccgccccggcgtcctcctctccgcagccggctgcc
gcgcacgtcccgcacctcgccgcgcagttcgacgcgctgccggccgtctggcgcgacgtg
ctgaaacccttcaccgacagcgatgcgtacgcaccgctgtgccgcttcgtcgacgacgaa
cgcgcagccggcaagacggtctacccgaccgatgtgttccgcgcgctgcgcctgacgagc
ccggacgacgtgaaggtcgtgattctcggccaggacccttaccacggcgacgatcgcggc
acgccgcaggcgcacggcctcgcattttcggtgccgccggccgtacgcacgccgccgtcg
ctgcgcaacatcttcaaggaaatcgccgcgaacttcggccacgacacgccgcgtcacggc
tgcctcgatagctgggcgcgccagggcgtgctgttgctgaacaccgtgctgacagtggag
cgcggcgcggccgcgagccatgcgaagcgcggctgggagcaatgcacggacacgctgatc
cgcgaactcgccaaccgccatcgcgggctcgtgttcatgctgtggggcgcgcatgcgcag
gcgaagcgcgcgctattcgatgcgagcgcgcactgcgtgctcgaggcgccgcatccgtcg
ccgctgtccgcacaccgcggcttcctcggttgccgtcacttcgcgctcgcgaacgactat
ctggtcgaagcgggccgcgagccgatcgactggcgcctgccggaagtcgccgaaacgctc
gcgtaa

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