Burkholderia diffusa: WI26_02590
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Entry
WI26_02590 CDS
T04698
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bdf
Burkholderia diffusa
Brite
KEGG Orthology (KO) [BR:
bdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdf03016
]
WI26_02590
Enzymes [BR:
bdf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
WI26_02590
Transfer RNA biogenesis [BR:
bdf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
WI26_02590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AOI56563
LinkDB
All DBs
Position
1:565213..567300
Genome browser
AA seq
695 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFEKPAASELMQEADSA
AQQIDLDFLWECAPAEEFAYTALAAEYFGATYGPVERAALVLRLHGSPVYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQAQYEEELKAGKLPEAFAGKVLGLLTRPDKNAIEYKA
MEAAAGARGVSPARLMLDCGGIASPRALHEARFLAEFFPHGTGFPPVTVGPLPDDLPRAD
VEAFSIDDITTTEIDDAFSVEHLSDGRVRIGVHIAAPALGIVRGDAVDAIARARLSTVYM
PGDKITMLPDDVVDVFTLKEGDYRPALSLYIIVNRETQEIVANETRAELVYVKNNLRHNT
LDELVNEETLAAGTGDYPHKDDIAVLWPLAQALFEKRQIARAGYGLKREVQRNTDYNFYV
EGEHVTITPRRRGSPLDLIVSELAILANSTWGAFLHDHTVPGIYRSQRGFGAPGPKRTRM
QTTAAPHEGLGVAQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKPKDADLYAV
VQGFDDTYTAYADYQRRMEYFWCLRWLAQEQKKQVVASVVKGDLVRLEEIPLLLHVPGLG
VHARGTRVLLEVMSLDELTIEASVRLLNVLDAPTVTSGDAADDEDETEGGDDTLVDAQDA
SAEAEAEALAEADGAAEGGEAASGKDQEGEEGRAS
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccaa
ggcgacgcatttcaggtcgagttgcccggcgggcggcgtgcgaaggtgcgtgcgaaagac
gtgctgatcgaattcgagaagccggccgcgagcgagttgatgcaggaagccgattcggcc
gcgcaacagatcgacctggatttcctgtgggagtgcgcgccggccgaggaattcgcgtat
acggcgctggccgcggaatacttcggcgcgacctacggcccggtcgagcgcgcggcgctg
gtgctgcggctgcacggctcgcccgtctacttccgccgcaaggggcgcggtcagtatcag
cgcgcgccggaagagcagctcaagatggcgctcgcgtcgctcgagcgcaagcgccagcag
gcgctcgtccaggcgcagtatgaagaggaactgaaggccggcaagctgccggaagcgttc
gcgggcaaggtgctcgggctgctgacgcggccggacaagaatgcgatcgaatacaaggcg
atggaagccgcggccggggcgcgcggcgtatcgccggcgcggctgatgctcgactgcggc
ggtatcgcgtcgccgcgtgcgctgcacgaggcgcgcttcctcgcggaattcttcccgcac
ggcacgggctttccgcccgtcacggtcggcccgctgccggacgacctgccgcgcgcggac
gtcgaggcgttctcgatcgacgacatcacgacgaccgaaatcgacgacgcgttctcggtc
gagcacctgtccgacggtcgcgtgcggatcggcgtgcacatcgcggcgccggcgctcggc
atcgtgcgcggagacgcggtcgacgcgatcgcgcgcgcacgcctgtcgaccgtctacatg
ccgggcgacaagatcacgatgctgccggacgacgtcgtcgacgtgttcacgctgaaggaa
ggcgattaccgcccggcgctgtcgctgtacatcatcgtcaaccgcgagacgcaggagatc
gtggcgaacgagacgcgcgccgaactcgtgtacgtgaagaacaatctgcgccacaacacg
ctcgacgagctcgtcaatgaagagacgctcgcggccggcaccggcgactacccgcacaag
gacgacatcgccgtgctgtggccgctcgcgcaggcgctgttcgagaagcgccagatcgcg
cgcgcgggctacggcctgaagcgcgaagtgcagcgcaacaccgactacaacttctacgtg
gaaggcgagcacgtgacgatcacgccgcgtcgccgcggctcgccgctcgacctgatcgtg
tcggagctcgcgattctcgcgaactccacctggggcgcgttcctgcacgatcacacggtg
ccgggcatctaccgctcgcagcgcggcttcggcgcgcccggcccgaagcgcacgcgcatg
cagacgacggccgcgccgcacgagggcctcggcgtcgcgcagtatgcgtggagcacgtcg
ccgctgcgccgctacgtcgacctcgtcaaccagtggcagctgctcgcgtgcgtgcagcac
ggcgtcaccgcgaagctcgccgcgccgttcaagccgaaggacgccgacctgtacgcggtc
gtgcagggcttcgacgatacgtacacggcctacgctgactaccagcgccggatggagtat
ttctggtgcctgcgctggctcgcgcaggagcagaagaagcaggtcgtcgcgagcgtcgtg
aagggcgatctcgtgcgcctcgaggaaattccgctgctgctgcacgtgccgggcctcggt
gtgcatgcgcgcggcacgcgcgtgctgctcgaggtgatgtcgctcgacgagctgacgatc
gaggcgtcggtgcggctgctgaacgtgctcgacgcgccgacggtgacgagcggcgacgcg
gccgacgacgaagacgagaccgaaggcggcgacgacacgctggtcgatgcgcaagacgcg
tcggcggaagccgaggccgaggcactggccgaagcggacggcgcggccgagggcggcgag
gccgcgagcggcaaagaccaggaaggcgaagaggggcgcgcatcatga
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