Burkholderia diffusa: WI26_04500
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Entry
WI26_04500 CDS
T04698
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bdf
Burkholderia diffusa
Pathway
bdf03030
DNA replication
bdf03430
Mismatch repair
bdf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WI26_04500
03430 Mismatch repair
WI26_04500
03440 Homologous recombination
WI26_04500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdf03032
]
WI26_04500
03400 DNA repair and recombination proteins [BR:
bdf03400
]
WI26_04500
Enzymes [BR:
bdf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WI26_04500
DNA replication proteins [BR:
bdf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WI26_04500
DNA repair and recombination proteins [BR:
bdf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WI26_04500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AOI56911
LinkDB
All DBs
Position
1:984900..986027
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AA seq
375 aa
AA seq
DB search
MSDFRPSDPACEQPLVFVDLETTGGSSSEHRITEIGVVEISPLGVSTWTTLVNPGQSIPP
FIQQLTGISDEMVRDAPSFASLAPVLFERLDGKLFVAHNASFDRGFLRAEFERAGFAFNP
DVLCTVRLSRALFPREARHGLDALIERHGLVPAARHRALADADLLWQFWRKLHEIVPIER
LRDQIARTTRHFRLAGGMTEAWLDTAPAGCGAYALFGESDEALYVGRSVRVRQRLRALLT
GERRSSKEMRIAQQVRRVEWRETGNELGAMLAEAQWIARLRPSYNRRSAAENARAGNAPW
PFDGPVAFEAGDERRLFHVIDGWRYLGAAESLDAAAQLVADGADGAFEPHTHRLLQTHLA
RGLQLIPLAALTPAD
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatttccgtccgtccgatcccgcctgcgaacagccgctcgtcttcgtcgacctc
gaaaccaccggaggctcgtcctccgagcatcgcatcacggaaatcggcgtggtcgaaatc
agcccgctcggcgtatcgacatggacgacgctggtcaatccggggcaatcgattccaccg
ttcatccagcaactgaccggcatttccgatgagatggtgcgcgacgcgccgtcgttcgct
tcgctcgcgcccgtgctgttcgaacgactcgacggcaagttgttcgtcgcgcacaacgcg
agcttcgatcggggcttcctgcgtgccgaattcgagcgggccggcttcgcgttcaatccg
gacgtactgtgcacggtgcggctgtcgcgggcgctgtttccgcgggaggcgcgacacgga
ctcgatgcgctgatcgaacgccacggtctcgttcctgccgcccgccaccgggcgctcgcg
gatgccgatcttctttggcagttctggcggaaactgcacgagatcgtgccgatcgagcgt
ctgcgcgaccagatcgcgcgcacgacgcgccacttccgtctcgcgggcggcatgaccgaa
gcgtggctcgataccgcaccggcaggatgcggcgcgtacgcgctgttcggggagagcgac
gaagcgctgtacgtcggccgcagcgtgcgcgtgcggcagcgattgcgcgcgctgctgacc
ggcgagcggcgctcgtcgaaggaaatgcgtattgcgcagcaggtgcgacgtgtcgaatgg
cgggagaccggcaacgaactcggcgcaatgctcgcggaagcgcagtggatcgctcgcctg
cggccgtcatacaaccggcgttccgcagccgaaaacgcccgtgccggcaatgcgccttgg
ccgttcgacggcccggtcgcgttcgaggcgggtgacgagcgtcgcctgtttcacgtaatc
gatggctggcgctatctcggtgcggccgaatcgctcgatgcggccgcgcaactcgtggct
gatggtgcggacggcgccttcgaaccgcatactcaccgcctgctgcagacgcatctcgcg
cgcggcctgcaactgattccgctagcggcactcacgcctgccgactga
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