Burkholderia diffusa: WI26_04650
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Entry
WI26_04650 CDS
T04698
Name
(GenBank) formate dehydrogenase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
bdf
Burkholderia diffusa
Pathway
bdf00630
Glyoxylate and dicarboxylate metabolism
bdf00680
Methane metabolism
bdf01100
Metabolic pathways
bdf01120
Microbial metabolism in diverse environments
bdf01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
bdf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
WI26_04650
09102 Energy metabolism
00680 Methane metabolism
WI26_04650
Enzymes [BR:
bdf01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
WI26_04650
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_10
Fer4_6
Fer4_21
Fer4_17
Fer4_9
Fer4_Nqo3
Fer4_15
Fer4_8
Fer4_16
Fer4_2
Fer4_4
Fer4_NDSU1
Motif
Other DBs
NCBI-ProteinID:
AOI56938
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Position
1:complement(1017665..1020616)
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AA seq
983 aa
AA seq
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MSLDTNNVRQGGCGSGQCACKSAAQARMRDPFDETDYGTPQRHADTDVTLEIDGQPVTVP
AGTSVMRAAIEAGVNVPKLCATDSLEPFGSCRLCLVEIEGRRGYPASCTTPAEAGMKVRT
QSDRLQSLRRNVMELYISDHPLDCLTCPANGDCELQDMAGVVGLREVRYGFDGANHLREQ
KDESNPYFTYDPSKCIVCNRCVRACEETQGTFALTIAARGFESRVAAGESESFMASECVS
CGACVAACPTATLQEKSVVQLGQAEHSVVTTCAYCGVGCSFKAEMKGTQVVRMTPYKNGL
ANEGHACVKGRFAWGYATHKDRITKPMIREKITDPWREVSWEEALTYAATQFRKLQQKYG
RDSIGGITSSRCTNEETYLVQKLVRAAFGNNNVDTCARVCHSPTGYGLKTTLGESAGTQT
FASVGQADVIVVMGANPTDGHPVFGSRMKRRIREGAKLIVIDPRRIDVVDGPHVKATYHL
QLRPGTNVAMVNALAHVIVTEGLVANAFVAERCDTRAFEQWRDFVSRAENSPEATADVTG
VPAALVREAARLYATGGNAAIYYGLGVTEHAQGSTTVMGIANLAMATGNIGREGVGVNPL
RGQNNVQGSCDMGSFPHELPGYRHISDAIVRSQFEAAWSATLQPEPGLRIPNMFDAALDG
SFKGLYCQGEDIVQSDPNTQHVAAALSSMECIVVQDIFLNETAKYAHVLLPGSTFLEKDG
TFTNAERRISRVRKVMPPLAGYADWEVTLLLSQALGYDMHYTHPSEIMDEIARLTPTFSG
VSYEKLDALGSIQWPCNEQAPDGTPTMHIDAFVRGKGRFVITQFIPTPEKVTQRYPLILT
TGRILSQYNVGAQTRRTENVRWHEEDRLEIHPHDAEDRGIRTGDWVGIESRAGQTVLRAL
VSDRMQPGVVYTTFHFPESGANVITTDSSDWATNCPEYKVTAVQVMPVAQPSDWQRAYAR
FNSEQLDLLEHRVATPAAATTGK
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcgacacgaacaacgtccgccaaggcggctgcggctcgggccaatgcgcgtgc
aagagcgccgcccaggcgcgcatgcgcgatccgttcgacgaaaccgactacggcacgccg
caacggcatgccgataccgacgtcacgctcgaaatcgacggccagccggtgacggtgccg
gccggcacgtcggtgatgcgcgccgcgatcgaagccggcgtcaacgtgcccaagctctgc
gcgaccgactcgctcgaaccgttcggctcgtgccgtctgtgcctggtcgaaatcgaaggc
cggcgcggctatccggcatcgtgcacgacgcccgccgaagccgggatgaaagtacgtacg
cagtcggaccggctgcagtcgctgcgccgcaacgtgatggagctgtacatctccgatcat
ccgctcgactgcctcacctgccccgccaacggcgactgcgagctgcaggacatggctggc
gtggtcgggctgcgcgaagtgcgctacggcttcgacggcgcgaatcacctgcgcgagcag
aaggacgaatcgaatccgtacttcacatacgatccgtcgaagtgcatcgtctgcaaccgc
tgcgtgcgcgcgtgcgaggaaacgcaaggcacgttcgcgctgacgatcgccgcgcgcggt
ttcgaatcgcgtgtcgccgccggcgaaagcgaatcgttcatggcatcggaatgcgtatcg
tgcggcgcctgcgtcgccgcgtgcccgaccgccacgctgcaggagaagtccgtcgtccag
ctcggccaggccgagcactcggtcgtcacgacctgcgcgtactgcggcgtcggctgctcg
ttcaaggccgagatgaagggcacgcaggtcgtgcgcatgacgccgtacaagaacggcctc
gcgaacgaaggccacgcatgcgtgaagggccgcttcgcgtggggctacgcgacgcacaag
gaccgcatcacgaagccgatgatccgcgagaagatcaccgacccgtggcgcgaagtcagc
tgggaagaggcgctcacgtacgcggcgacgcaattccgcaagctgcagcagaaatacggc
cgcgattcgatcggcggcatcacgtcgtcgcgctgcacgaacgaggaaacctacctcgtg
cagaagctcgtgcgcgcagcgttcggcaacaacaacgtcgacacgtgcgcacgcgtgtgc
cactcgccgaccggctacggcctgaagacgacgctcggcgaatcggccggcacgcagacc
ttcgcgtcggtcggccaggccgacgtgatcgtcgtgatgggcgcgaatccgaccgacggc
cacccggtattcgggtcgcgcatgaagcggcgcatccgcgaaggcgcgaagctgatcgtg
atcgacccgcgccgcatcgacgtggtcgacggcccgcacgtgaaggccacctaccacctg
cagttgcgccccggcaccaacgtcgcgatggtcaacgcgctcgcgcacgtcattgtcacc
gaagggctcgtcgccaacgcattcgtcgctgaacgctgcgacacgcgcgcattcgagcaa
tggcgcgatttcgtatcgcgtgccgagaactcaccggaagcgacggcggacgtgacaggt
gtgccggccgccctggtgcgcgaagccgcgcgcctttacgcgacgggcggcaacgccgcg
atctactacggcctcggcgtgaccgaacacgcgcaaggctcgacaacggtgatgggcatc
gcgaacctcgcgatggctaccggcaacatcggccgcgaaggcgtcggcgtcaatccgctg
cgcggccagaacaacgtgcaaggctcgtgcgacatgggttcgttcccgcacgagctgcct
ggctaccggcacatcagcgacgcaatcgtgcgcagccagttcgaggcagcatggtcggcc
acgctgcaaccggaaccggggctgcgcatcccgaacatgttcgacgcggcgctcgacggc
agcttcaaggggctttactgccagggcgaggacatcgtccagtcggacccgaacacgcag
cacgtcgcggccgcgctgtcgtcgatggaatgcatcgtcgtgcaggacatcttcctgaac
gagaccgcgaagtacgcgcacgtgctgctgccgggttcgactttcctcgagaaggacggc
acgttcacgaacgcggagcgccggatctcgcgcgtgcgcaaggtgatgccgccgcttgcg
ggttacgccgactgggaagtgacgctgctgctgtcgcaggcgctcggttacgacatgcac
tacacgcatccgtcggaaatcatggacgagatcgcgcggctcacgccgaccttctcgggc
gtgtcgtacgagaagctcgacgcgcttggcagcatccagtggccgtgcaacgaacaggcg
ccggacggcacgccgacgatgcacatcgacgcgttcgtgcgcggcaagggccggttcgtg
atcacgcagttcattccgacgccggaaaaggtcacgcagcgttatccgctgatcctgacc
acgggccgcatcctgtcgcaatacaacgtcggcgcgcagacacgccggactgagaacgtc
cggtggcatgaagaagaccgcctcgagattcatccgcacgatgcggaggatcgcgggatc
cggaccggcgactgggtcggcatcgaatcgcgggccggccagacggtgctgcgtgcgctc
gtgtccgaccgcatgcagccgggtgtcgtgtacacgacattccacttccccgagtcgggc
gcgaacgtaatcacgacggacagttccgactgggccacgaactgcccggaatacaaggtc
acggccgtgcaggtgatgccggttgcgcagccgtcggactggcagcgcgcgtatgcgcgc
ttcaactcggagcagctcgacctgctcgagcaccgcgtcgccacgccggccgccgcgacg
acgggcaagtga
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