Burkholderia diffusa: WI26_05590
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Entry
WI26_05590 CDS
T04698
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
bdf
Burkholderia diffusa
Pathway
bdf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WI26_05590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdf03400
]
WI26_05590
Enzymes [BR:
bdf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
WI26_05590
DNA repair and recombination proteins [BR:
bdf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WI26_05590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AOI57110
LinkDB
All DBs
Position
1:1214195..1217533
Genome browser
AA seq
1112 aa
AA seq
DB search
MLHLFYSNRHETLADALLDDLAAFPARNGPWAPQQVIVPSAALRRRLELDIAARHGVCAN
VEFTYLAQWLWAQIGRVLTVPARSPFAPDRLVWRCYRLFAQGAGGAPWLASPRLAAYLSA
SDDAMRYELAQRVAAVLDHYLTYRPEWLAAWQAGESVLAGDAAPRGISDAARDDEHWQAA
LWRALLAELSDSGTPPAHRFLVEARNLDLETVARADWPESVSVFALPTMPPLHVALLREL
SRWIDVRVYALNPCREFWFDIVTAAHAEALDAAGRLDYQEVGHPLLAEWGRQTQAQLHML
HELTENAASGDASRFVANPAPTWLARVQNAILDLQPEAELGEAPAERGIEVHVCHSLARQ
LEVLHDRLLAWFDADASLQPSDVLVAVADLAAAGPLIDAVFGTAGAGGARVPYRITGLPP
SQANPVARVLLEWLALPERQVGAPELVEWLRVDAVAARYGIDATALETVQTWLAAAGARR
GLSPTVSDDAAVPAPRHTFSDALARLFLGYAMPEGAAPVGAWLPIEAATGSEAELLGRLA
RFTDDLDGFSRRLADAHTPRGWSELFADTLARFFDSGAAYADALSGVRDALDAMLAAMTE
GASDEALPAAVVRAGLAAALDDPARGGVPWGGVTFSSLTSLRGLPYRVVCLLGMDDGVLP
SLARADEFDLMAVLPKLGDRQRRDDERNLFLDLLLAARDRLLIAYTGRSIRDNAPLPPAA
LVDELLDHLALVTAGEDAPPDAVDAARRAFIVEHPLQPFAAEYFRPGSELVSYDAERATL
ASLLAAEAARDATREQPFFAQPLPAEPVEPVAFSEFERFWRHPARALLRARLGIVLSDAQ
AELLDTEPFALDFAGSDALAERVLPLLIESDEGGVHDHALRIADASPELPGGATGAVWRD
QALGSMTQLASNVRRALADGMERRPFTLAIAPAWPDIEQALFGADDATLSRDAVHAPLEL
HGTLNRLTPAGQVIYRYARPSARDYLSAWLAHLVYCAVEPDGPRRTLWFGSGGAFELTPV
AAPLERLAPLAALFRAGRRMPLRFFPRSAWARVSDGEAKAASVWINERVVSEADDPAIAI
AWRGANPSLDEPFGTLARLVFEPMLEHLKEVA
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgctccatctcttctattcgaaccgtcacgaaacgctggccgacgcgctgctcgacgac
ctggccgcgttcccggcccgcaatggcccgtgggcgccgcaacaggtcatcgtgccgagc
gctgcgctgcgccgccgtctggaactcgatatcgccgcgcgccacggcgtgtgcgcgaac
gtcgagttcacgtatctcgcgcagtggctatgggcgcagatcggccgcgtgctgacggta
ccggcgcgctcgccgttcgcgcccgatcgccttgtgtggcgttgctaccggctgttcgcg
cagggcgcgggcggcgcgccgtggcttgcgtcgccgcggctggccgcgtatctgtccgcg
tccgacgatgcgatgcgctacgagctcgcgcaacgcgtcgcggccgtgctcgatcattac
ctgacctatcggcccgaatggctggccgcctggcaggccggcgagtcggtgctcgcgggc
gacgccgcgccgcgcggaatcagcgatgccgcacgtgacgacgagcactggcaggcggcg
ctgtggcgcgcgctgctcgcggagctgagcgacagcggcacgccacccgcgcatcgcttc
ctcgtggaggcgcgcaacctcgatctcgaaaccgtcgcgcgtgccgactggccggaatcg
gtcagcgtgttcgcgctgccgacgatgccgccgctgcacgtcgcgctgctgcgcgagctg
tcgcgctggatcgacgtgcgcgtctatgcactcaatccgtgccgcgaattctggttcgac
atcgtcaccgccgcgcatgccgaggcactcgacgcggccggccggctcgactatcaggaa
gtcggccatccgctgctcgcggagtggggccggcagacgcaggcgcaactgcacatgctg
cacgaactgaccgaaaacgccgcgtcaggcgatgcgtcgcgtttcgtcgcgaatcccgcg
ccgacctggctcgcgcgcgtgcagaacgcgatcctcgaccttcaaccggaggccgagctc
ggcgaagcgccggccgagcgcgggatcgaggtgcacgtgtgccatagcctcgcgcgccag
ctcgaggtgctgcatgaccgcctgctcgcgtggtttgacgcggacgcgtcgctgcagccg
tccgatgtgctggtggcggtcgccgatctcgcggcggccgggccgctgatcgatgccgtg
ttcggcacggcgggcgccggcggcgcgcgcgtgccttaccggatcaccggcctgccgccg
tcgcaggcgaacccggtcgcgcgcgtgctgctcgagtggctcgcgttgccggaacggcag
gtcggcgcgcccgagttggtcgaatggctgcgcgtcgacgcggtggccgcccgttacggc
atcgatgcgaccgcgctcgagacggttcagacctggctcgcggccgccggcgcgcggcgc
gggctgtcgccgacggtgagcgacgatgcggccgtgcctgcgccgcgccatacgttttcc
gatgcgctcgcgcgactcttcctcggctatgcgatgcccgaaggcgcggcaccggtcggc
gcgtggctgccgatcgaggcggcgaccggcagcgaggccgaactgctcggtcggctggcg
cgcttcacggacgatctcgacggcttctcgcgacggctcgctgatgcgcacacgccgcgc
ggatggagcgaactgttcgccgacacgctcgcgcggttcttcgactccggtgccgcgtat
gccgatgcgctttcgggcgtacgggacgcgctcgacgcgatgcttgccgcgatgacggaa
ggcgcgtccgacgaggcgttgccggcggccgtcgtacgcgcggggctggcggccgcgctc
gacgatccggcgcgcggcggggtgccatggggcggcgtcacgttctcgtcgctgacgagc
ctgcgcgggctgccataccgcgtcgtatgcctgctcggcatggacgacggcgtgctgcca
agcctggctcgcgcggacgagttcgacctgatggccgtgctgccgaagctcggcgaccgg
caacgccgcgacgacgaacgcaacctgtttctcgacctgctgctcgccgcgcgcgaccgg
ctgctgattgcctatacggggcgcagcattcgcgacaacgcgccgttgccgcccgcggcg
ctcgtcgacgaactgctcgaccatctcgcgctcgtcacggccggcgaggacgccccaccg
gatgcggtcgatgccgcacggcgcgcgttcatcgtcgaacatccgctgcaaccgttcgcg
gccgagtatttccggcccggcagcgaactggtttcgtacgatgccgagcgcgcgacgctc
gcgtcgctgctggcagccgaagccgcgcgcgatgcgacgcgcgagcagccgttcttcgcg
cagccgctgccggccgagccagtcgaacccgtcgcgttcagcgaattcgaacggttctgg
cggcatccggcccgcgcgctgctgcgagcgcggctcggcatcgtgctttccgacgcgcag
gccgaactgctcgacacggagccgttcgcactcgacttcgcaggcagcgacgcgctcgcc
gagcgcgtgctgccgctgctgatcgaatcggatgaaggcggcgtgcacgatcacgcgttg
cgcatcgcggacgccagcccggaactgccgggcggtgcaacgggcgccgtctggcgcgac
caggcgcttggctcgatgacgcagcttgcgtcgaacgtgcggcgtgcgctggccgacggc
atggaacgacggccgttcacgctcgcgatcgcaccggcatggcccgacatcgaacaggcg
ctgttcggtgccgatgatgcgacgctgtcgcgcgatgcggtgcatgcgccgctcgagttg
cacggcacgctgaaccggctgacgccggcgggccaggtcatctatcgctatgcacggccg
agcgcgcgcgattacctgtccgcgtggctcgcgcacctcgtctattgcgcggtggagccc
gacggtccgcgccgcacgctgtggttcggcagcggcggcgcattcgaactcacgccggtc
gcggcaccgctcgagcgcttggcgccgctcgccgcgctgtttcgtgcggggcggcgcatg
ccgctgcgattcttcccgcgcagcgcgtgggcgcgcgtgtccgacggcgaggcgaaggcc
gcgagcgtctggatcaacgagcgcgtggtgagcgaagccgacgatccggcgatcgcgatc
gcatggcgcggtgcgaatccgtcgctcgacgagccgttcggcacactcgcgcggctcgtg
ttcgagccgatgctggagcatctgaaggaggtcgcatga
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