Burkholderia diffusa: WI26_05600
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Entry
WI26_05600 CDS
T04698
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bdf
Burkholderia diffusa
Pathway
bdf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WI26_05600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdf03400
]
WI26_05600
Enzymes [BR:
bdf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
WI26_05600
DNA repair and recombination proteins [BR:
bdf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WI26_05600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
Helicase_RecD
SLFN-g3_helicase
RecD_N
DEAD
AAA_22
MukB
AAA_25
CbiA
ATPase
Motif
Other DBs
NCBI-ProteinID:
AOI57112
LinkDB
All DBs
Position
1:1221231..1223501
Genome browser
AA seq
756 aa
AA seq
DB search
MNVSDDTLEFTGGLVARLPEPADFGIALAEGFARRIGDLSRRAGAPAAAARWAARAAFAT
SRATAGGHVCVSLGALAQRYEEPVDDVRAALAASGVVAFGTLARGDERPLIVDRHDHLYL
SRYFDYERRLADALVAQAGVAAPGDVLSPDRLRDSLARYFGPATGEVDWQRVAAIVALTG
RVTIVSGGPGTGKTTTVVGVLACLLDAHPGLRIALAAPTGKAAQRMQEALHARAGDLPPE
LAARLPDTSYTLHRLLGGGGAAGFRHHRDNPLPYDLIVVDEASMIDVALAAHLLDALAPG
ARLVLLGDKDQLAAVEAGAVFAELSARPTFTAAARTRIAEALGIDEAAFVAALPVPDGEA
TGAVAGAAQAPARTQAFAPLSASAARKPSARRNVDTRQASLFDDGPSAEVVSPTASSSPE
PVDLDSASAATDPAWIEADELAWLDAVELAPLDPSDPAVAPIDATRADEIAAASPAPAPL
ADCVVWLERNYRFGLDSPIGRLSLTIRRGDVQGTLDALPADDAAAASFHDDAGETLAAST
VERLARRFEAYLDALRAALSEPVPDPLPLFDALNRFRILCATRTGSRGAEHVNALVATHV
RHAARVPLAVGAHWFTGRPIMVTRNDYALGLFNGDIGIALPDAHGVLRVWFRRADGTARA
VSPAALPPHETAFALTVHKSQGSEFDEAALVLPASFGRVLTRELVYTAVTRARTRVQVIG
PRRVLVQAVATRTQRDSGLAARVDEALARRRKETSR
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgtccgacgatacgctcgaatttaccggcggcctcgtcgcgcggctgcccgag
ccggcggatttcggtatcgcgctcgcggaaggattcgcgcgacgcatcggcgacctgtcg
cgccgtgcgggggcgccggccgcggctgcgcgctgggcggcgcgcgccgcgttcgcgacg
agccgggcgaccgcgggcggccatgtatgcgtgtcgctcggcgcgctcgcgcagcgctac
gaggaaccggtcgacgacgtgcgcgcggcacttgccgcaagcggtgtggtggcgttcggc
acgctcgcgcgcggcgacgagcggccgctgatcgtcgaccggcacgaccatctgtatctg
tcgcgctatttcgactatgaacgacggctcgccgatgcgctcgtcgcgcaggctggcgtc
gccgcaccgggcgacgtgctgtcgcccgaccggttgcgcgacagtctcgcgcgttatttc
gggcccgcgacgggcgaagtggactggcagcgcgttgcggcgatcgttgcgctgacaggg
cgcgtgacgatcgtcagcggcggccccggcaccggcaagacgacgacagtcgtcggcgtg
ctggcttgtctgctcgacgcacatccggggttgcgcatcgcgctggcggcgccgaccggc
aaggccgcgcagcggatgcaggaagcgctgcacgcgcgggcaggtgacctgccgccggaa
cttgccgcgcgcctgcccgacacgtcgtatacgctgcatcgcctgctgggcggcggcggt
gccgcgggttttcgccatcatcgcgacaatccattgccttacgacctgatcgtggtcgac
gaggcgtcgatgatcgacgttgcgctcgccgcgcatctgctcgatgcgctcgcgccgggc
gcacggctcgtgctgctcggcgacaaggatcagctggccgcggtcgaagccggcgccgtg
tttgccgaactcagcgcgcgaccgacgtttaccgccgctgcgcgcacgcgcatcgcggag
gcgctcgggatcgacgaagcggctttcgttgctgctttgccggtgccggacggcgaggcc
acgggcgcggttgctggtgcggctcaagccccggcccggacccaggcattcgcgccgttg
tcggcgagtgctgcgcgcaagccatcggcgcggcgcaatgtggatacgcgccaggcgtcg
ctgttcgacgacggcccttcggcagaagtggtttccccgactgcttcgtcgtcacctgaa
ccggtcgacctcgatagcgcgtccgcggccaccgatccggcatggatcgaggccgacgaa
ctcgcgtggctcgacgccgtcgagctcgcgccgctcgatccgtccgatccggcggtcgcg
ccgatcgacgccacgcgagccgacgaaatcgccgccgcgtcgcccgcgcccgcaccgctc
gcggactgcgtcgtgtggctcgagcgcaattaccgtttcggtctcgattcgccgatcggc
cgcttgtcgctcacgatccgccgcggcgacgtgcagggcacgctcgatgcattgccggcc
gacgacgccgctgccgcgtcgtttcacgacgatgcgggcgagacgctcgcggcgtcgacg
gtcgaacggctcgcgcgccggttcgaggcatacctcgatgcgttgcgtgccgcgttgtcc
gagccggtgcccgatccgttgcctttgttcgatgcgctcaaccgcttccggatcctgtgc
gcgacgcgcacaggatcacgcggcgccgagcacgtcaatgcgctggtggccacgcacgtg
cggcatgccgcgcgcgtgccgctcgcggtcggcgcacactggttcaccggacggccgatc
atggtgacgcgcaacgactacgcgctcggcctgttcaacggcgacatcggcatcgcgttg
ccggacgcgcacggcgtgctgcgcgtatggttccgccgcgcggacggcaccgcgcgcgcc
gtgtcgcccgcggcgctgccgccgcacgaaacggcgttcgcactgaccgtccacaaatcg
cagggctccgaattcgatgaggccgcgctcgtgctgccggcgtcgttcggccgcgtgctc
acgcgcgagctcgtctacaccgccgtcacgcgtgcgcgcacgcgcgtgcaggtgatcggc
ccgcggcgcgtgctggtgcaggcggtcgcgacacgtacgcaacgcgattcgggccttgcg
gcccgcgtcgacgaggcgctcgcacggcgccgcaaggagacgtcacgatga
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