Burkholderia diffusa: WI26_05905
Help
Entry
WI26_05905 CDS
T04698
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
bdf
Burkholderia diffusa
Brite
KEGG Orthology (KO) [BR:
bdf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bdf01011
]
WI26_05905
Enzymes [BR:
bdf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
WI26_05905
Peptidoglycan biosynthesis and degradation proteins [BR:
bdf01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
WI26_05905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM1_NFP_LYK
DUF6491
Motif
Other DBs
NCBI-ProteinID:
AOI57168
LinkDB
All DBs
Position
1:1281359..1282933
Genome browser
AA seq
524 aa
AA seq
DB search
MRLILSAMVVLLLAACASQAPVANNAADSQAASNYLRKSATAKETVDVDKQSVGDLTSAD
SDLWGRIRRGFQMPDLQSDLVDMQTTWYTQRPEYVQRMTERSQKYLYHIVEELEARHMPT
ELALLPFIESAFNPQALSVAKAAGMWQFMPGTGRTYNLKRNMWQDERRDVLASTSAALDY
LSRLHDMFGDWYLALAAYNWGEGNVQRAIARNQAAGLPTDYQSLRMPNETRNYVPKLQAV
KNIIANPQQFGLTLPEIPNHPYFVTVTTSRDIDVAVAAKLANLSLDEFRSLNPSFSKPVI
LGATEPQILLPFDNAAAFEKNLKAYSGQLSTWTTYTVSERARPAAIAEKIGVDADTLMSV
NKIPAGMRLKPGSTIVVPRGDDDDEDISADVAENGVLAMEPDVPDTRKMLIRVRRKQSMA
AIAGRYGVSVGQLKAWNRTHRDLAMPGQALVLHVPVGRAVPAEPGPERIATSTAGAHIER
ASLSVGGKSRGAKHGSAKPVARATKSAPAKAAPAKAVAHKGKKK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttatattgagtgcgatggtggtcctgctgctcgccgcttgcgcgagccaggct
cctgtcgccaacaacgccgccgattcacaggcggcgtccaactacctccgtaaatcagcc
accgccaaagaaactgtcgacgtcgacaaacaatccgtcggcgacctgaccagtgccgac
tccgatctctggggccgcatccgtcgcggcttccagatgcccgacctgcagagcgacctc
gtcgacatgcagacgacctggtacacgcaacgtcccgagtacgtgcagcgcatgaccgag
cgctcgcagaagtacctgtatcacatcgtcgaggaactcgaggcgcgccatatgccgacc
gagctcgcgctgctgccgttcatcgaatccgcgttcaacccgcaggcgctgtcggtcgcg
aaggcggccggcatgtggcagttcatgccgggcacgggccgcacgtacaacctgaagcgc
aacatgtggcaggacgagcgccgcgacgtgctcgcgtcgacgagcgccgcgctcgattac
ctgtcgcgcctgcatgacatgttcggcgactggtatctggcgctggccgcatacaactgg
ggcgagggcaacgtgcagcgtgcgattgcgcgcaatcaggcggccggcctgccgaccgac
taccagagcctgcggatgccgaacgagacgcgcaactacgtgccgaagctgcaggcggtg
aagaacatcatcgcgaatcctcagcagttcggcctgacgctgccggagatcccgaaccac
ccgtatttcgtgacggtcacgacgtcgcgcgacatcgacgtggcggtagccgcgaagctc
gcgaacctgtcgctcgacgagttccgttcgctgaacccttcgttctcgaagccggtgatc
ctgggcgcgaccgagccgcagatcctgctgccgttcgacaacgcggcagcgttcgagaag
aacctgaaggcctacagcggccaactgtcgacgtggaccacctatacggtcagcgagcgc
gcgcgcccggccgcgatcgccgagaagatcggcgtcgatgccgatacgctgatgtcggtc
aacaagattcccgccggcatgcgcctgaagccgggctcgacgatcgtcgtgccgcgcggc
gatgacgatgacgaggacatcagtgcggacgtcgcggaaaacggcgtgctcgcgatggag
cccgacgtgcccgacacgcgcaagatgctgattcgcgtgcgccgcaagcagtcgatggcg
gcgattgccggccgctacggcgtgtcggtcggccagctgaaggcatggaaccgcacgcat
cgcgatctcgcgatgccgggccaggcgctcgtgctgcacgtgccggtcggtcgcgcggtg
ccggcggagccgggtccggagcggatcgcgacgtcgactgccggcgcgcatatcgagcgc
gcaagcctgtccgtcggcggcaagtcgcgtggcgcgaagcacggttccgcgaagccggtg
gctcgcgcgacgaagtctgctcctgcgaaggcggcgccggccaaggctgttgcacacaag
ggcaagaagaagtaa
DBGET
integrated database retrieval system
