Burkholderia diffusa: WI26_05925
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Entry
WI26_05925 CDS
T04698
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
bdf
Burkholderia diffusa
Pathway
bdf00220
Arginine biosynthesis
bdf00240
Pyrimidine metabolism
bdf00250
Alanine, aspartate and glutamate metabolism
bdf01100
Metabolic pathways
bdf01110
Biosynthesis of secondary metabolites
bdf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
bdf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
WI26_05925 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
WI26_05925 (carB)
00220 Arginine biosynthesis
WI26_05925 (carB)
Enzymes [BR:
bdf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
WI26_05925 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
CoA_binding_2
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
AOI57172
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All DBs
Position
1:1286603..1289857
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AA seq
1084 aa
AA seq
DB search
MPKRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGYKVVLVNSNPATIMTDPNT
ADVTYIEPITWEVVARIIEKERPDAILPTMGGQTALNCALDLHHHGVLEKFGVELIGASP
EAIDKAEDRQKFKEAMTKIGLGSAKSGIAHSMEEATQVHAEIMAGTGGSGYPVVIRPSFT
LGGSGGGIAYNREEFEEICKRGLDLSPTRELLIEESLLGWKEYEMEVVRDRADNCIIVCS
IENLDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDG
RMVVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGQTPASFEPTID
YVVTKIPRFAFEKFREADSRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGLDEKS
TDRDEIAIEIHEPGPDRIWYVGDAFRIGMTAEEIFAETAIDPWFLEQIEQIILKEKALSG
RTLASLTFDELRFLKQSGFSDRRLAKLLGATPEDVRRRRVELNVRPVYKRVDTCAAEFAT
KTAYMYSTYEEECEAQPTTNKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMV
NCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLEAHGV
PIIGTSPDMIDAAEDRERFQKLLQDLGLRQPPNRTARAEEEALALAAEIGYPLVVRPSYV
LGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAIECDVDCICDGESVFIGGVM
EHIEQAGVHSGDSACSLPPYSLSKETVAELKRQTGAMAKALNVVGLMNVQFAIQQVPQAD
GSKQDIIYVLEVNPRASRTVPYVSKATSLPLAKIAARAMVGQKLAQQGVTKEVEPPYFSV
KEAVFPFVKFPTVDPVLGPEMRSTGEVMGVGRTFGEALFKSQLAAGSRLPESGTVLLTVM
DADKPKAVEVARMLHDLGYPIVATKGTAAAIEAAGVPVKVVNKVKDGRPHIVDMIKNGEI
ALVFTTVDETRQAIADSRSIRMSAQAHKVTYYTTMSGARAAVEGLRYLKDLEVYDLQGLH
ARLN
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgcacagacatcaaaagcatcctcatcatcggcgccggcccgatcatcatc
ggccaggcttgcgagttcgactattcgggcgcgcaggcttgcaaggcgctgcgtgaagag
ggctacaaggtcgtcctcgtgaacagcaatccggcgacgatcatgaccgaccccaacacg
gccgacgtcacctacatcgagccgatcacgtgggaagtcgtcgcccgcatcatcgagaag
gagcgcccggacgcgatcctgccgacgatgggcggccagaccgcgctgaactgcgcgctc
gacctgcaccaccacggcgtgctcgagaagttcggtgtcgaactgatcggtgcgtcgccg
gaagcgatcgacaaggcggaagaccgccagaagttcaaggaagcgatgaccaagatcggt
ctcggctccgcgaagtcgggcatcgcgcattcgatggaagaagcgacccaggtgcatgcc
gaaatcatggccggcaccggcggcagcggctacccggtcgtgattcgcccgtcgttcacg
ctcggcggctcgggcggcggcatcgcatacaaccgcgaggaattcgaggagatctgcaag
cgcggcctcgacctgtcgcccacgcgtgaactgctgatcgaagagtcgctgctcggctgg
aaggaatacgagatggaagtcgtgcgcgaccgcgccgacaactgcatcatcgtctgctcg
atcgaaaacctcgacccgatgggcgtgcacaccggcgactcgatcacggttgcgccggcg
cagacgctcaccgacaaggaataccagatcctgcgcaacgcatcgctcgcggtgctgcgc
gagatcggcgtcgacaccggcggctcgaacgtgcagttctcgatcaacccgaaagacggc
cgcatggtcgtcatcgagatgaacccgcgcgtgtcgcgttcgtccgcgctcgcgtcgaag
gcgaccggcttcccgatcgcgaaggtcgctgcgaagctggcggtcggctacacgcttgac
gagctgaagaacgaaatcaccggcggccagacgccggcatcgttcgagccgacgatcgac
tacgtcgtcacgaagatcccgcgtttcgcgttcgagaagttccgtgaagccgattcgcgc
ctgaccacgcagatgaagtcggtcggcgaagtgatggcgatcggccgcacgttccaggaa
tcgttccagaaggcgctgcgcggtctcgaagtcggcgtcgacggtctcgacgagaagtcg
accgaccgcgacgagatcgcgatcgagatccacgagccgggcccggaccgcatctggtac
gtcggcgatgcattccgcatcggcatgacggccgaggaaatcttcgcggaaacggcgatc
gatccgtggttcctcgaacagatcgagcagatcatcctgaaggaaaaggcgctgtcgggc
cgcacgctcgcatcgctgacgttcgacgagttgcgcttcctgaagcagagcggcttctcc
gaccgccgcctcgcgaagctgctcggcgcgacgccggaagacgtccgccgccgccgcgtc
gaactgaacgtgcgcccggtctacaagcgcgtcgacacctgcgcggccgagttcgcgacc
aagacggcctacatgtactcgacctacgaggaagagtgcgaggcgcagccgaccaccaac
aagaagatcatggtgctgggcggtggcccgaaccggatcggccagggcatcgagttcgac
tactgctgcgtgcacgcggcgctcgcgatgcgcgaggacggctacgaaacgatcatggtc
aactgcaacccggaaacggtgtcgaccgactatgacacatccgaccgcctgtacttcgag
ccgctgacgctggaagacgtgctcgagatcgtcgacaaggaaaagccggtcggcgtgatc
gtccagtacggcggccagacgccgcttaagctcgcgctcgacctcgaggcgcacggtgtg
ccgatcatcggcacgtcgccggacatgatcgatgctgccgaagaccgcgagcgtttccag
aagctgctgcaggacctcggcctgcgccagccgccgaaccgcaccgcacgcgccgaagaa
gaagcgctcgcgctggcggccgaaatcggctacccgctcgtcgtacgcccgtcgtacgtg
ctgggcggccgcgcgatggaaatcgtccacgagccgcgcgacctcgagcgctacatgcgc
gaggccgtgaaggtatcgaacgattcgccggtgctgctcgaccgcttcctgaacgatgcg
atcgagtgtgacgtcgactgcatctgcgacggcgagtcggtgttcatcggcggcgtgatg
gagcacatcgagcaggcgggtgtccactcgggcgactcggcatgctcgctgccgccgtac
tcgctgtcgaaggaaaccgttgccgagctgaagcgccagaccggcgcgatggcgaaggcg
ctgaacgtggtcggcctgatgaacgtgcagttcgcgatccagcaggtgccgcaggcggac
ggctcgaagcaggacatcatctacgtgctcgaagtgaacccgcgcgcatcgcgcacggtg
ccgtacgtgtcgaaggcgaccagcctgccgctcgcgaagatcgcggcgcgcgcgatggtc
ggccagaagctcgcgcagcagggcgtgacgaaggaagtcgagccgccgtacttcagcgtg
aaggaagcggtgttcccgttcgtcaagttcccgaccgtcgacccggttctcggacccgaa
atgcgttcgaccggcgaagtgatgggcgtcggccggacgttcggcgaggcgctgttcaag
tcgcagctcgcagcgggctcgcgcctgccggagtcgggcacggtgctgctgaccgtgatg
gacgccgacaagccgaaggccgtcgaagtcgcgcgcatgctgcacgacctcggctacccg
atcgtcgcgaccaagggcacggctgccgcgatcgaagcggccggcgtgccggtgaaggtc
gtcaacaaggtgaaggacggccgtccgcacatcgtcgacatgatcaagaacggcgagatc
gcactcgtgttcacgacggtcgacgagacgcgccaggcgatcgccgattcgcgttcgatc
cgcatgagcgcgcaggcgcacaaggtcacgtactacacgacgatgtcgggcgcgcgcgcg
gccgtcgaaggcttgcgctacctgaaggatctggaagtctatgatttacaaggtcttcac
gctcgcctaaactaa
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