Burkholderia diffusa: WI26_06830
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Entry
WI26_06830 CDS
T04698
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bdf
Burkholderia diffusa
Brite
KEGG Orthology (KO) [BR:
bdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdf03016
]
WI26_06830 (truB)
Enzymes [BR:
bdf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
WI26_06830 (truB)
Transfer RNA biogenesis [BR:
bdf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
WI26_06830 (truB)
Prokaryotic type
WI26_06830 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AOI57340
LinkDB
All DBs
Position
1:1494279..1495211
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AA seq
310 aa
AA seq
DB search
MTTAAPQRPRVPRRALDGVLLLDKPVGLSSNDALIRAKRLLLAKKAGHTGTLDPLASGLL
PLCFGEATKFSQDLLEADKTYEATMRLGVRTTTGDAEGEVLDTRAVECDRTAVEAALARF
IGEIVQVPPMYSALKRDGKPLYEYARAGQTVEREGRNVTIHALDLLACELPDVTFRVTCS
KGTYVRTLAEDIGEALGCGAHLTMLRRTGVGALTLEHAVTLDALSDAAEAARDAWLQPVD
ALLSTFPLVRLDEACAKRFLHGQRLPLSALASIDAAEGERVRVYDAARLLGVARKANGVL
APERLVVTAA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgcagctccccagcgtccacgtgtgccccggcgcgcgctggacggcgttctc
ctgctcgacaaaccggtcggcctgtcgagcaacgacgccctgattcgcgcgaagcgtctg
cttctcgcgaagaaagccggccacaccggcacgctcgatccgctggcctcgggcctgttg
ccgctgtgcttcggcgaggcgacgaagttctcgcaggacttgctggaagcggacaagacc
tacgaagcgacgatgcgtctcggcgtgcgcacgaccaccggagatgctgaaggcgaagtg
ctcgacacgcgtgccgtcgaatgcgaccggacggcggtggaggcggcgctcgcgcgcttt
atcggcgagatcgtgcaagtgccgccgatgtattcggcgctcaagcgcgatggcaagccg
ctgtacgaatatgcgcgcgcgggccagaccgtcgaacgggaaggccgcaacgtgacgatc
catgcgctcgacctgttggcctgcgaattgcccgacgtgacgtttcgcgtgacctgcagc
aagggcacgtatgtgcgcacgctggcggaggatatcggcgaagcgctcggttgcggtgcg
catctgacgatgctgcgtcgcacgggcgtcggcgcgctgacgctcgagcatgcggtgacg
ctcgacgcgctgtccgacgccgccgaggcggcgcgcgacgcgtggcttcagccggtcgac
gcgctgctgtcgacgtttccgctggtgcgtctcgacgaagcttgcgcgaagcggttcctg
cacggccagcgcctgccgctgtcggcgctcgcttcgatcgacgcggcggagggcgagcgt
gtgcgcgtgtacgacgcggcgcggctgctcggtgtggcgcgcaaggccaacggcgtgctc
gcgcccgaacgtctcgtcgtgacggctgcatga
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integrated database retrieval system
