Burkholderia diffusa: WI26_08440
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Entry
WI26_08440 CDS
T04698
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bdf
Burkholderia diffusa
Brite
KEGG Orthology (KO) [BR:
bdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdf03009
]
WI26_08440 (rimO)
Enzymes [BR:
bdf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
WI26_08440 (rimO)
Ribosome biogenesis [BR:
bdf03009
]
Prokaryotic type
ribosomal protein modification factors
WI26_08440 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AOI57627
UniProt:
A0AAW3P8H9
LinkDB
All DBs
Position
1:complement(1836034..1837395)
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AA seq
453 aa
AA seq
DB search
MSQSPKVGFVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTCGFIDEAVQES
LDAIGEALTENGKVIVTGCLGAKSSASGSNLIEEVHPKVLAVTGPHAVGEVMQAVHSHLP
KPHDPFVDLVPAAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVAEVMLEAE
NLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGKPIKTRMTDLVAALGELAAQYGAWVRL
HYVYPYPSVDEVIPLMAEGPFKGHVLPYLDVPFQHAHPEVLKRMKRPANAEKVLERVQKW
REICPDLTIRSTFIAGFPGETEAQFETLLDFIREAELDRVGCFAYSPVEGATANDLDGAL
PDDVREERRARFMEVAEEVSARRIQRKVGKTLKVLIDEVGEEGGIGRTAADAPEIDGVVY
VEPATKASKRYKVGDFVSVKITGADGHDLWGEV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtcccccaaagtaggcttcgtatcgctcgggtgcccgaaggcgctcgtcgac
tccgaacaaatcattacccagctgcgcgccgaaggttatgaaatctccggcacctacgac
ggtgccgacctcgtcgtcgtgaacacctgtggcttcatcgacgaagccgtgcaggaaagc
ctcgatgcgatcggcgaagcgctgaccgagaacggcaaggtgatcgtcaccggctgcctc
ggtgcgaagtcgagcgccagcggttcgaacctcatcgaggaggtccatccgaaggtgctc
gccgtcaccggtccgcacgcggtgggcgaagtgatgcaggccgtgcactcgcacctgccg
aagccgcacgatccgttcgtcgacctcgtgccggccgccggcatcaagctcacgccgcgc
cactacgcatacctgaagatatccgaaggctgcaaccaccgatgcacgttctgcatcatt
ccgtcgatgcgcggtgatctcgtgtcgcgtccggtcgcggaagtgatgctcgaggcggag
aacctgttcaagtcgggcgtgaaggaactgctcgtgatctcgcaagacacgagcgcgtac
ggcgtcgacgtgaagtaccgcacgggcttctggaacggcaagccgatcaagacacgcatg
accgatctggtcgccgcgctcggcgaactcgccgcgcagtacggcgcatgggtgcgcctg
cactacgtgtatccgtatccgagcgtcgatgaagtcattccgctgatggccgaaggcccg
ttcaagggccacgtgctgccatatctcgacgtgccgttccagcacgcgcatccggaagtg
ctcaagcgcatgaaacggccggcgaacgccgagaaggtgctcgagcgcgtgcagaaatgg
cgtgagatctgcccggacctgacgatccgcagcacgttcatcgccggcttccccggcgag
acggaagcgcagttcgaaacgctgctcgacttcatccgtgaggcggaactcgatcgcgtc
ggctgctttgcgtattcgccggtcgaaggcgcgaccgcgaacgacctggacggcgcgctg
ccggacgacgtccgcgaagagcgccgtgcgcgcttcatggaagtcgccgaggaagtgtcg
gcacggcggatccagcggaaggtcggcaagaccctcaaggtgctgatcgacgaagtcggc
gaggaaggcggcatcggccgcacggcggcggatgcgccggagatcgacggggtcgtctac
gtcgagccggcgacgaaggcgtcgaagcgctacaaggtcggcgatttcgtgtcggtgaag
atcaccggcgcggacggccacgacctgtggggcgaggtctga
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