Burkholderia diffusa: WI26_08655
Help
Entry
WI26_08655 CDS
T04698
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bdf
Burkholderia diffusa
Pathway
bdf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WI26_08655 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdf03021
]
WI26_08655 (rho)
03019 Messenger RNA biogenesis [BR:
bdf03019
]
WI26_08655 (rho)
Transcription machinery [BR:
bdf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
WI26_08655 (rho)
Messenger RNA biogenesis [BR:
bdf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
WI26_08655 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOI57665
UniProt:
A0A1B4BSL6
LinkDB
All DBs
Position
1:1884969..1886231
Genome browser
AA seq
420 aa
AA seq
DB search
MHLSELKSLHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPD
GFGFLRSPEMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
GQPPEASKHKIMFENLTPLHPNKPLSLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHV
QVAEMVIEKAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREEMLIKPEILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKSNSEFFDLMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatccgagctcaagtctctgcacgtgtccgaactgatcgaaatggccaatggc
ctggagatcgaaaacgcgaaccgcctgcgcaagcaggagctgatgttcgccattctcaaa
aagcgcgccaagacgggagagacgatcttcggcgacggcacgctcgaagtgctgccggac
ggtttcggcttcctgcgctcgccggaaatgtcgtacctcgcgagcaccgatgacatctac
atcagcccgtcgcagatccgccgcttcaacctgcacaccggcgacaccatcgaaggtgaa
gtccgcacgccgaaggacggcgagcgctacttcgcgctggtgaaggtcgacaaagtcaac
gggcagccgcccgaggcctcgaaacacaagatcatgttcgagaacctcacgccgctgcac
ccgaacaagccgctgtcgctcgagcgcgaaatgcgcggcgaggagaacgtcaccggccgc
atcatcgacatgatcgcgccgatcggcaagggccagcgcggcctgctcgtcgcgtcgccg
aagtcgggcaagaccgtgatgctccagcacatcgcacacgcgatcaagcagaaccatccg
gacgtcatcctgttcgtgctgctgatcgacgagcgccccgaagaagtgaccgaaatgcag
cgctcggtcgccggcgaagtgatcgcgtcgacgttcgacgaaccggccacgcgtcacgtg
caggtcgccgaaatggtgatcgagaaggccaagcgcctcgtcgaaatgaagcacgacgtc
gtgatcctgctcgactcgatcacgcgtctcgcacgcgcttacaacaccgtgatcccggcg
tcgggcaaggtgctgacgggcggcgtcgacgcgaacgcgctgcagcgcccgaagcgcttc
ttcggcgcggcgcgcaacatcgaggaaggcggctcgctgacgatcatcggcaccgcgctg
atcgaaaccggcagccgcatggatgacgtgatctacgaagagttcaagggcaccggcaac
atggaagtgcacctcgagcgccgtctcgcggaaaagcgcgtctatccgtcgatcaacctg
aacaaatcgggcacgcgtcgcgaagaaatgctgatcaagcctgagatccttcagaagatc
tgggtgctgcgcaagttcatccacgacatggacgaagtcgaggcaatggaattcctgctc
gacaagatccgccagacgaagagcaactccgagttcttcgacctgatgcgccgcggcggc
tga
DBGET
integrated database retrieval system
