Burkholderia diffusa: WI26_09970
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Entry
WI26_09970 CDS
T04698
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
bdf
Burkholderia diffusa
Pathway
bdf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bdf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
WI26_09970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdf03400
]
WI26_09970
DNA repair and recombination proteins [BR:
bdf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
WI26_09970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
MutS_C
DUF5817_CT
Motif
Other DBs
NCBI-ProteinID:
AOI57905
LinkDB
All DBs
Position
1:2160883..2163540
Genome browser
AA seq
885 aa
AA seq
DB search
MTTLSPEAFAGHTPMMQQYLRIKADHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQR
GASAGTPIKMAGVPHHAVEQYLAKLVKMGESVAICEQIGDPATSKGPVERKVVRVVTPGT
LTDAALLSDKNDVYLLAMYTGHNKRGVAVNIGLAWLNLASGALRLAEIEPDQLGAALERI
RPAEILTADGATDAVPAGAGAIKRVPAWHFDIASGTQRLCDQLDVAGLDGFGAHSLTSAC
GAAGALLLYAAATQGQQLRHVRSLKVENETEYIGLDPATRRNLELTETLRGTESPTLYSL
LDTCCTTMGSRLLRHWLHHPPRASVAAQSRQQAIGALLEAPANASLDALRSALRQIADVE
RITGRLALLSARPRDLSSLRDTFAALPALRERISAIVANADALTRVDAALAPPAECLDLL
TSAIAPEPAAMVRDGGVIARGYDAELDELRDISENCGQFLIDLEARERARTGIANLRVEY
NKVHGFYIEVTRGQTDKVPDDYRRRQTLKNAERYITPELKTFEDKALSAQERALARERAL
YDGVLQALLPFIPECQRVASALAELDVLAAFAERARTLDWVAPAFTDEIGIEIEQGRHPV
VEAQVEQFIANDCRFGAERKLLLITGPNMGGKSTFMRQTALIALMAYVGSYVPAKSACFG
PIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALA
WAIARHLLAQNGCYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVFLHAVNDGPAN
QSYGLQVAQLAGVPAPVIRAARKHLAYLEQQSATQHTPQLDLFSAPSAAIDELECADAPA
PSDIPHPALERLRDIDPDDLKPRDALDLLYELRTLVRSHDADGHA
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgctgtcgcccgaggcctttgcaggccacactccaatgatgcagcagtacctg
cgcatcaaggccgatcaccccgacacgctcgtcttctaccggatgggcgacttctacgag
ctgttcttcgaggatgcggagaaagcggcgcgcctgctcgacctgaccctcactcaacgc
ggcgcatcggccggcacgccgatcaagatggcaggcgtcccgcaccacgcggtcgaacag
tatctggcgaaactcgtgaagatgggtgaatcggtcgcgatctgcgagcagatcggcgac
cccgctacgtcgaagggccccgtcgagcgcaaggtcgtgcgcgtcgtcacgcccggcacg
ctgaccgatgcggcgctgctgtccgacaagaacgacgtctacctgctcgcgatgtacacg
ggccacaacaagcgcggcgtcgcggtcaatatcggcctcgcatggctgaacctcgcaagc
ggcgcgctacggctcgccgaaatcgaacccgaccagctaggcgccgcgctcgaacgcatt
cggccggccgagatcctcacggcggacggcgcaaccgacgccgtgcccgctggcgccggt
gcgatcaagcgcgtgccggcatggcatttcgatattgcgtcgggcacccagcgtctgtgc
gaccagctcgacgtcgcgggcctcgacggcttcggcgcgcattcgctgacgagcgcatgc
ggggctgccggcgcacttctgctgtacgcggccgccacccaggggcagcagttgcgtcac
gtgcgcagcctgaaggtcgagaacgaaaccgaatacatcgggctcgatccggcgacgcgc
cgcaacctcgaactgaccgaaacgctgcgcggcaccgaatcgccgacgctgtactccctg
ctcgacacctgctgcacgacgatgggcagccgcctgctgcgtcattggctgcatcacccg
ccgcgcgcgtccgtcgccgcacagtcgcgccagcaggcgatcggcgcactgctcgaggcg
cccgcgaacgcgagcctcgacgcactgcgcagcgcgctgcgtcagatcgccgacgtcgaa
cgaatcaccggacgtctcgcgctgctgtccgcgcgaccgcgcgacctgtcgagcctgcgc
gacacgttcgccgcgctgcccgcgctgcgcgaacgcatcagcgcgatcgtcgcgaacgcg
gatgcgctcacccgcgtcgacgcggcgctcgcgccgcccgccgagtgtctcgacctgctg
acgagcgcgatcgcccccgaacctgccgcgatggtgcgcgacggcggcgtgattgcgcgc
ggctacgatgccgaactcgacgaactgcgcgacatctccgagaactgcgggcaatttctg
atcgatctcgaggcgcgcgagcgtgcccgcaccggcatcgcgaacctgcgtgtcgaatac
aacaaggtgcacggcttctacatcgaggtcacacgcggccagaccgacaaggtacccgac
gactatcgccgtcgccagacgctgaagaatgccgagcgctacatcacgcccgaactgaag
accttcgaggacaaggcgctgtccgcacaggaacgcgcgctggcccgcgagcgcgcgctg
tacgacggcgtgctgcaggcactgctgccgttcattccggagtgtcagcgagtcgcgtcg
gcgctcgcggagctcgacgtgctcgccgcgttcgccgagcgcgcccgcacgctcgactgg
gtcgcgcctgccttcaccgacgagatcggcatcgagatcgaacagggacgccaccctgtc
gtcgaagcgcaggtcgagcagttcatcgcgaacgactgccggttcggcgcggagcgcaaa
ctgctgctgatcaccggtccgaacatgggcggtaagtcgaccttcatgcgacagacagca
ctgatcgcgctgatggcgtacgtcggcagctacgtgccggcgaagtcggcctgcttcggc
ccgatcgaccggatcttcacgcggatcggcgcggcagatgacctcgccggcggccgatcg
accttcatggtcgagatgaccgaagcggctgcgatcctgaacgacgcgacaccgcagagc
ctcgtgctgatggacgaaatcggtcgcggcacgtcgacgttcgacggcctcgcgctcgca
tgggccatcgcgcgtcatctgctggcgcagaacggctgctacacgctgttcgcgacgcat
tacttcgagctgacgcaactgcccgccgaattcccgcaagcggccaacgtccatctgtcg
gccgtcgagcacggccacggcatcgtgttcctgcacgcagtcaacgacggcccggcgaac
cagagctacggattgcaggttgcgcagctcgcgggcgtgcccgcgccggtgatccgcgcc
gcgcgcaagcatctcgcgtatctcgaacagcagtctgccacgcagcatacgccgcagctc
gatctgttcagcgcgccgtccgccgcgatcgacgaactcgaatgcgcggacgcgccggcg
ccgtccgacatcccgcatcccgcacttgaaaggctgcgcgacatcgatcccgacgacctc
aagccgcgcgacgcgctcgacctgctgtacgaactgcgcacactcgttcgctcgcacgat
gccgacgggcacgcataa
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