Burkholderia diffusa: WI26_19980
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Entry
WI26_19980 CDS
T04698
Name
(GenBank) farnesyl-diphosphate farnesyltransferase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bdf
Burkholderia diffusa
Pathway
bdf00100
Steroid biosynthesis
bdf00909
Sesquiterpenoid and triterpenoid biosynthesis
bdf01100
Metabolic pathways
bdf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bdf00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
WI26_19980
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
WI26_19980
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bdf01006
]
WI26_19980
Enzymes [BR:
bdf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
WI26_19980
Prenyltransferases [BR:
bdf01006
]
Terpene biosynthesis
Squalene/phytoene synthase
WI26_19980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AOI59901
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All DBs
Position
2:1025479..1026543
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AA seq
354 aa
AA seq
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MTTHTNPAYLLGDLLKNVSRSFYLTLRVLPDGMRAPVGLAYLLARAADTIADTALVAPDR
RAALLTDLRDDVERLGDGAALSRALEDVTRMQTDSHEHVLLGSMQPMLALLRAQPEADRA
SIRKVVATLTSGMEFDLRTFPDEQSGEVASLPDRDVLDRYTYLVAGCVGEFWTDMTGAHT
RAARGWDLADMREKGIRFGKALQMTNILRDCAKDLRIGRCYLPDDVLAAHRVGVADLMSP
DASARARGVLIDLLRVALDQYRDACRYTLAIPRRFVRLRLACLWPIMIGLETLELLAGHD
AWLDPARPAKVPRKRIYRIMASSLALVGSNGAIRARMNALVDAVNARIEQPSAH
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgacgactcataccaatcccgcctatctgctcggcgacctgctgaagaacgtttcccgc
tccttctacctgacgcttcgcgtgttgcccgacggcatgcgcgccccggtcggcctggcc
tacctgctcgcgcgcgcggccgacacgatcgccgacacggcgcttgtcgcacccgatcgc
cgcgcggcgctgctgaccgatctgcgcgacgacgtcgagcggctcggcgacggcgcggcg
ctgtcgcgtgcgctggaggacgtgacgcggatgcagacggattcgcacgagcacgtgctg
ctcggctcgatgcagccgatgctcgcgctgctgcgcgcgcaaccggaggccgatcgcgcg
tcgatccgcaaggtcgtcgcgacgttgacgtcggggatggaattcgacctgcgcacgttc
cccgacgagcagtcgggcgaggtcgcgtcgctgccggaccgcgacgtgctcgatcgctac
acgtatctggtcgccggttgcgtcggcgaattctggaccgacatgaccggcgcgcacacg
cgggccgcgcgcggctgggacctggccgacatgcgcgagaagggcattcgtttcggcaag
gcgctgcagatgaccaacatcctgcgcgactgcgcgaaggatctgcggattggccgctgc
tacctgccggacgacgtgctggccgcccaccgcgtcggcgttgccgacctgatgtcgccc
gacgcgtcggcgcgtgcgcgcggcgtgctcatcgacctgctgcgcgtggcgctcgatcag
tatcgcgacgcatgccggtacacgctggcgattccgcgccgcttcgtgcgtctgcggctt
gcgtgcctttggccgatcatgatcggcctcgaaacgctcgaactgctggccggccatgac
gcgtggctcgatccggcgaggccggcgaaggtgccgcgcaagcggatctaccggatcatg
gcgtcatcgcttgcgctcgttggctcgaacggagcgatccgcgcgcgcatgaacgcgctc
gtcgatgcggtgaacgcgcggatcgaacagccgtccgcgcactga
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