Burkholderia diffusa: WI26_29565
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Entry
WI26_29565 CDS
T04698
Name
(GenBank) endopolygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bdf
Burkholderia diffusa
Pathway
bdf00040
Pentose and glucuronate interconversions
bdf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bdf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
WI26_29565
Enzymes [BR:
bdf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
WI26_29565
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
AOI61813
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All DBs
Position
3:658884..661034
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AA seq
716 aa
AA seq
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MTTRLSGPHARPRVLGLFAALVATAAALSACGGGDSSTASSAAATSPPAAVFQVGTTTVD
AALPAEPALPADTQVCSTLEAANTLVSRPDGSLPPEADPSIAGVGKAVSSATANPDQARI
QAALDACGAMVDAEVGATIAAADASATAAQKTAAVPNVNIAGASGEELAKPKYRASKFAV
RLVVNQTGGGNSFISGPLTLPSGVTLWIDKGVTLYASRDVKAYAPNVAGPYCGNTAVSAT
KAGSSSNCLALITGTNLVNSAVVGDGRIDGRGYAELVTSDAKYPLMKVDLTCSNTYAAYR
SGTVAPDGTACDDGGTVVDSKSTVRNMTWWDLAYLGNMVQNGTTGFGSQSNFRLMVFNYA
KNLTLYRITLNNSPNFHVVPSGVDGLTIWNVKVQTPTLAAFANPAGNGNPLYNGQTFNAD
NVKNTDAFDPGSASKPTSTTLSTGSTTTSTSAISFDGYLKNFVFAYNYVSTGDDDIALKG
SNNPSPAGSGLFGIDGNRDVRSDRKWGVAIAHNHIYWGHGISIGSETNGGVTNVQVYDNA
FWDSEEGLRIKSDYARGGEVSNIRYSNICIRDAKNALLFTPYYSTKAVPASGPLYPNFHD
ISLANVMILGAAGVKLQGFEANTGGYGEPAFPLVMSLTDVVADTPDAISTIASDANLTLR
NVNLPVFASTANRVVVNGQATLNARPANVVDCSKAFVDFPGIDQSNPFGSTWAPSL
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgacaacccgactttccgggccgcacgcacgcccgcgcgtgctcggtctgttcgcagcg
ctcgtcgcgaccgccgccgcgctgagcgcgtgcggcggcggcgattcgagcaccgccagc
agcgcggccgccacctcgccacccgccgccgtgttccaggtcggcacgaccaccgtcgac
gccgcgttgccggccgagccggccctgcccgccgatacgcaggtctgcagcacgctcgaa
gccgccaatacgctcgtgagccgccccgacggctcgctgccgccggaggccgatccgtcg
atcgcaggcgtcggcaaggcggtgtcgagtgcgacggcgaaccccgatcaggcgcgcatc
caggccgcgctcgacgcatgcggcgccatggtggacgccgaggtcggcgccacgatcgcg
gccgccgacgcatcggccaccgccgcgcagaagacggcggccgtgccgaacgtgaacatc
gccggtgcgtccggcgaggagctggccaagcccaagtaccgcgcgagcaagttcgcggtg
cgactcgtcgtcaaccagacgggcggcggcaacagcttcatcagcgggccgctgacgttg
ccgtccggcgtgacgctatggatcgacaagggtgtgacgctgtacgcatcgcgcgacgtg
aaggcgtatgcgccgaacgtcgccgggccgtattgcggaaacacggccgtcagcgcaacg
aaggccggcagttcgtcgaactgcctcgcgctgatcaccggcacgaatctcgtgaattcg
gccgtggtcggcgacggcagaatcgacgggcgcggctacgcggaactcgtgacgtccgac
gcgaaatacccgctgatgaaagtcgacctcacctgctcgaacacctacgcggcatacagg
agcggcacggtcgcgccggacggcaccgcatgcgacgacggcggcaccgtcgtggattcg
aagtcgaccgtgcgcaacatgacgtggtgggatctcgcgtatctcggcaacatggtgcag
aacggcacgaccggcttcggctcgcagtcgaatttccgattgatggtgttcaactacgcg
aagaacctgacgctgtaccgcatcacgctgaacaacagcccgaatttccacgtggtgccg
agcggcgtcgacgggctgacgatctggaacgtgaaggtgcagacgccgacactcgccgcg
ttcgcgaacccggccggcaacggcaacccgctgtacaacgggcagacgttcaacgcggac
aacgtgaagaacaccgacgcattcgatccgggctccgcatcgaaaccgacctcgacgacg
ctgtcgaccggcagcacgacgacgtcgaccagtgcgatttcgttcgacgggtatctgaag
aacttcgtgttcgcgtacaactacgtgagcaccggtgacgatgacatcgcgctgaagggc
agcaacaatccgtcgcccgcgggctcgggcctgttcggcatcgacggcaatcgcgacgtg
cgttcggatcgcaaatggggcgtcgcgatcgcgcacaaccacatctactgggggcacgga
atctcgatcggcagcgagaccaacggcggcgtgacgaatgttcaggtgtacgacaatgcg
ttctgggattcggaggaaggcttgcggatcaagtccgactatgcgcgcggcggcgaggtg
agcaacatccgctattcgaacatctgcatccgcgacgcgaagaacgcgctgctgttcacg
ccgtattacagcaccaaggccgtgccggcgagcgggccgctgtatccgaacttccacgac
atctcgctcgccaacgtcatgatcttgggcgcggccggcgtgaagctgcaggggttcgaa
gcgaataccggcgggtatggcgagccggcgttcccgctcgtgatgtcgctgaccgacgtg
gtggccgacacgcccgacgccatctcgacgatcgcatccgatgcgaacctcacgctgcgc
aacgtgaacctgccggtgttcgcatcgaccgcgaaccgcgtcgtcgtgaacggccaggcg
acgctcaatgcgcgtccggccaacgtggtcgactgcagcaaggcgttcgtcgacttcccc
ggcatcgaccagtcgaacccgttcggctcgacgtgggcgccgtcgttgtaa
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