Bradyrhizobium daqingense: LPJ38_03935
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Entry
LPJ38_03935 CDS
T07756
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bdg
Bradyrhizobium daqingense
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdg03016
]
LPJ38_03935
Enzymes [BR:
bdg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LPJ38_03935
Transfer RNA biogenesis [BR:
bdg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LPJ38_03935
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UFS89952
LinkDB
All DBs
Position
complement(859873..860487)
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AA seq
204 aa
AA seq
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MTVRLHRGDLPDLTRYAGAVAIDTETMGLNPHRDRLCVVQLSPGDGSADVVQIPKGHTDA
PNLKALLANPAITKIFHFARFDVAVLYQTFGVMTGPIYCTKIASRLTRTYTDRHGLKDLV
REVLNIDLSKQQQSSDWGSDSLTEPQLAYAASDVLHLHALRERLDAMLVREGRSQLAQSC
FDFLPTRAVLDLQGWAEEDIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtacgcctgcatcgcggcgacctgcccgacctcacccgctacgccggagcggtg
gcgatcgacaccgagaccatgggcctcaatccgcaccgcgaccggctctgcgtggtgcag
ctctcgcccggcgacggcagcgccgacgtggtgcagatccccaagggccataccgacgcg
ccgaacctgaaggccctgctcgccaatcccgccatcacgaagatcttccacttcgcgcgg
ttcgacgtcgcggtgctgtaccagaccttcggcgtcatgacagggccgatttattgcacc
aagattgcctcgcgcctgacccgcacctacaccgatcgccatggcctgaaggacctcgtg
cgcgaagtgctcaacatcgacctctccaagcagcagcagtccagtgactggggttccgac
agcctgaccgagccgcagctcgcctacgccgcgtccgacgtgctgcatctgcatgccttg
cgcgagcggctcgatgccatgctggtgcgggaaggccgcagccagctggcgcagtcctgt
ttcgacttcctgccgactcgtgccgtgcttgacctccagggctgggcggaagaggacatt
ttcgcgcattcctga
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