Bradyrhizobium daqingense: LPJ38_04970
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Entry
LPJ38_04970 CDS
T07756
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
bdg
Bradyrhizobium daqingense
Pathway
bdg00020
Citrate cycle (TCA cycle)
bdg00190
Oxidative phosphorylation
bdg00650
Butanoate metabolism
bdg00720
Other carbon fixation pathways
bdg01100
Metabolic pathways
bdg01110
Biosynthesis of secondary metabolites
bdg01120
Microbial metabolism in diverse environments
bdg01200
Carbon metabolism
Module
bdg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bdg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bdg_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LPJ38_04970 (sdhA)
00650 Butanoate metabolism
LPJ38_04970 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LPJ38_04970 (sdhA)
00720 Other carbon fixation pathways
LPJ38_04970 (sdhA)
Enzymes [BR:
bdg01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LPJ38_04970 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
Thi4
DAO
Motif
Other DBs
NCBI-ProteinID:
UFS90146
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Position
complement(1080136..1081971)
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AA seq
611 aa
AA seq
DB search
MANTTNGSGNSAPATNGKAYPIEDHTYDVVVVGAGGAGLRAVVGCGEAGLRTACITKVFP
TRSHTVAAQGGISASLGNMHKDDWRWHMYDTVKGSDWLGDQDAIEYMVRNAPDAVYELEH
WGVPFSRTEDGKIYQRPFGGMTTEFGKAQAQRTCAAADRTGHAMLHTMYGQSLRHAAEFF
IEFFAIDLIMDDQGTCRGVIALKLDDGTLHRFRAQTTILATGGYGRAYASCTSAHTCTGD
GGGMVLRAGLPMQDMEFVQFHPTGIYGSGCLVTEGARGEGGYLVNSEGERFMERYAPSAK
DLASRDVVSRAMTIEIREGRGVGKKKDHIFLHLDHLDPAVLAERLPGISESAKIFANVDV
TREPIPIVPTVHYNMGGIPTNYHGEVLTKRDGDDNAIIPGLMAIGEAACVSVHGANRLGS
NSLIDLVVFGRAAALRLAEKLTPNAKQPELPSNSAELALGRLDHYRYASGGTPTAKLREG
MQNVMQTNCAVFRTGEVLSEGQNLIAKVHSGITDIAVSDRSLVWNSDLVETLEFDNLISQ
AVVTMNSAANRTESRGAHAREDFSERDDKNWMKHTLTWLDDAGKVKIEYRPVHNYTMTND
VQYIPPKARVY
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggccaacacaacgaatggctcgggcaacagcgctcccgccaccaacggcaaggcctat
ccgatcgaagaccacacctacgacgtcgtcgtcgtcggtgccggcggcgccggcctgcgc
gccgtggtcggctgcggcgaagcgggcctgcgcaccgcctgcatcaccaaggtgtttccg
acccgctcgcacacggtcgcggcgcagggcggcatctccgcctcgctcggcaacatgcac
aaggacgactggcgctggcacatgtacgacaccgtgaaggggtcggactggctcggcgac
caggacgcgatcgaatacatggtgcgcaacgcgcccgacgcggtctacgagctcgagcat
tggggcgtgccgttctcgcgcaccgaggacggcaagatctaccagcgtccgttcggcggc
atgaccaccgagttcggcaaggcccaggcgcagcgcacctgcgccgccgccgaccgcacc
ggccacgccatgctgcacacgatgtacggccagtcgctgcgccacgcggccgaattcttc
atcgagttcttcgccatcgacctgatcatggacgaccagggcacctgccgcggtgtcatc
gcgctcaagctcgacgacggcacgctgcaccgcttccgcgcccagaccacgattctggcg
accggcggctacggccgcgcctatgcttcttgcacctcggcgcacacttgcaccggcgac
ggcggcggcatggtgctgcgcgccggtctgccgatgcaggatatggagttcgtgcagttc
cacccgaccggcatctacggatcgggctgcctcgtcaccgagggcgcgcgcggcgaaggc
ggctatctcgtcaactccgagggcgagcgtttcatggagcgctacgcgccgtcggcaaag
gatctcgcctcgcgcgacgtcgtctcgcgcgcgatgaccatcgagatccgcgaaggccgc
ggcgtcggcaagaagaaggaccacatcttcctgcatctcgaccatctcgatcccgcggtg
ctcgccgagcggctgcccggtatctccgaatccgcgaagatcttcgccaatgtcgacgtg
acgcgcgagccgatcccgatcgtgccgaccgtgcactacaacatgggcggcatccccacc
aactatcacggcgaagtgctgaccaagagggacggcgacgacaacgccatcatccccggc
ctgatggcgatcggcgaagccgcctgcgtctccgtgcacggcgccaaccgcctcggctcc
aactcgctgatcgacctcgtggtgttcggccgcgccgcggcgctccgcctcgccgagaag
ctcacacccaatgccaagcagcccgagctgccgtcgaactcggctgagctcgcgctcggc
cgcctcgaccattaccgctacgcctccggcggcacgccgacggcgaagctgcgcgaaggc
atgcagaatgtgatgcagaccaattgcgcggtgttccgcaccggcgaagtgctcagcgaa
ggccagaacctgatcgcgaaggtccacagcggcatcaccgacatcgcggtgtccgaccgc
tcgctggtgtggaattcggatctcgtcgagacgctcgaattcgacaatctgatctcgcag
gcggtggtgacgatgaactcggccgccaaccgcaccgagagccgcggcgcacatgcccgc
gaggacttctccgagcgcgacgacaagaactggatgaagcacacgctgacctggctggac
gatgccggcaaggtcaagatcgagtatcgcccggttcacaactacaccatgaccaacgac
gtgcagtacatcccgccgaaggcgcgtgtgtattga
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