Bradyrhizobium daqingense: LPJ38_08085
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Entry
LPJ38_08085 CDS
T07756
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
bdg
Bradyrhizobium daqingense
Pathway
bdg00300
Lysine biosynthesis
bdg01100
Metabolic pathways
bdg01120
Microbial metabolism in diverse environments
bdg01230
Biosynthesis of amino acids
Module
bdg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LPJ38_08085 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bdg01002
]
LPJ38_08085 (dapE)
Enzymes [BR:
bdg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
LPJ38_08085 (dapE)
Peptidases and inhibitors [BR:
bdg01002
]
Metallo peptidases
Family M20
LPJ38_08085 (dapE)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
UFS90686
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All DBs
Position
complement(1732419..1733585)
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AA seq
388 aa
AA seq
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MTDALSIARDLIRCPSVTPADAGALGVLEELLNAAGFTCHRVTFSEEGTADVDNLYARIG
SEGPHITFAGHTDVVPPGDESAWSVGAFSGEVKDGVLHGRGAVDMKGGIACSVAAVLQHL
AANGGKPRSDGKGSISFLITGDEEDVSINGTIKLLKWAAGRGEKFDHCVLGEPSNVETLG
DTIKVGRRGSQSGTLYVEGVQGHVAYPHRASNPVPDISRLIVAISDEPLDHGSAQFQASN
LEFTSVDVGNKASNVIPGEARAKFNIRYNDNHTQASLRELVETRLAKACGNRIKARIVWE
PSNSNVFVTKPGPFTDLAVAAIEEMTGRKPELSTSGGTSDARFISSYCPVIEFGLVGQTM
HQIDERVPVADLEKLTKVYRGILARYFA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgctctctccattgcccgtgacctgatccgctgcccctcggtgaccccggcc
gatgccggtgcgctcggggtgcttgaagaactcctcaacgccgccggcttcacttgccac
cgcgtgacgttcagcgaggaaggcaccgccgacgtcgacaatctctatgcgcggatcggc
agcgagggcccgcacatcacctttgccggacacaccgacgttgtgccgccgggtgacgag
agcgcctggagcgttggtgcgttctccggtgaggtgaaggacggcgtgctgcatggccgc
ggcgcggtcgacatgaagggcggcatcgcctgctcggtcgcagctgtcctgcagcatctc
gccgccaatggcggcaagccgcgcagcgatgggaagggctcgatctctttcctgatcacc
ggcgacgaggaagacgtctccatcaacggcaccatcaagctgctgaaatgggccgccggg
cgcggcgagaagttcgaccattgcgtgctgggcgagccttccaatgtcgagacactcggc
gacaccatcaaggtcggccgccgcggctcgcaatcgggcacgctctatgtcgagggcgtg
cagggccacgtcgcctatccgcatcgcgcctccaatccggtgccggatatttcgcggctg
atcgtggcgatctcggacgagccgctcgatcacggcagcgcgcaattccaggcctccaac
ctcgaattcacctcggtcgacgtcggcaacaaggcgagcaacgtcattcccggcgaggcc
cgcgcgaaattcaacatccgctacaacgacaaccacacgcaagcgagcttgcgtgagctg
gtcgagacgcgcctggcaaaagcctgcggcaaccgcatcaaggcccgcatcgtctgggag
ccctccaactccaacgtgttcgtgaccaagccgggcccgttcaccgatctcgcagtggcc
gcgatcgaggagatgaccggccgcaagccggagctgtcgacctcgggcggcacctcggac
gcgcgcttcatctccagctactgcccggtgatcgagttcggcctggtcggccagaccatg
caccagatcgacgagcgcgtgccggtggctgatctggaaaagctgaccaaggtgtatcgg
gggattttggcacggtattttgcttag
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